Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0196 ATGGAATTATCCAGTGGAAATTCGTGGGTGTCTACCAAAATTCAGAGCTCAGGTTCTGAAGAGGATTTGCAGGTATTGATGGATCagagaaaaaggaagagaatgCAATCGAATCGGGAATCAGCGAAGCGATCCCGGATGCGAAAGCAGAAGCACTTGGATGATCTGATGGCACAAGTGAATGAACTGAGAAAGGAAAATAGCGAAATCCTGAGCAGCATAAGCATCACCACCCAGCGTTTCCTGAATGTGGAGTCTGAGAATTCCATTTTGAGGGCTCGTATGGTGGAATTAAGCCACAGGCTACAATCCCTAAACGATATCCTCAATTACATCAATACCACCGCAGGGGTGTATGAATCTGATCATACCTATCTTTTTCCAGACAATTTCATCAATATCCCCTTTCTCAACCAACCCATTATGGCTTCTGCAGACATTTTTCAGTGTAATTTGTATTTCTTGCACAAGTTAATTAGATTGAGTTTGTGTATGTCAGCCACTATCATGGGATCAGCTTGTTGTGTTGCTGCAAAAGATCAGACTCTCCCCAACAAAAATGGTAATGAAAATTTGCATAGGAATGTTACATGTTCTCCATCTTGGAGCTTTCAGTGGGATAGTCAGGGCCGTGTTGCTGGTGAAATTGAGAATCCTTCTTATCACATGTCGCATGGAGTCAGAAGAAATGCTGGCATGGAGTTAAAAGAGTTATCAAGTCATGAAAGAGCTAATTTATCTGATGGGGGAATTACTCTGGAAAATCCTGTAACTCCTAATTCTCAAAAGTCCCCTGTTCATGAAGCATCCATTGCAAATCTGATGATTCCATCTTCAgATATGTCCAATACAAGCAATTGTTCTACAGTGGTTAATAATCCATCAGAATCGCCAGAAATTGCAGAATCTTCATTACCAAATCTTCCATTTTCGATACCTTCAGTTCTCTCAACACCAGGAGATCCTTTGCCTATtcacaaatatcatcaccttccCAATTCTGTGCCATCAAGATGGGCCCATTGTTCTCCCGGACACCCACTTTTGAGACAGATTTCTGACAGTTGGATCCTGGGTTTAAAATCACAAGACAACTCAATTTCTGAGGGAAGGCCATCATTTGTACTCTCCAGTTGCAGTAATGACATGGCAGCAGGATCACAAGGGGGATCATCTGATGGCTGGTCCATGCGAACATTTTCTGAGCTTGTGGCTTCATCTCAAAGGGAACGCTGGTCTTTTGACATTGAGTACTTTGGTTCAGGTCATGGTAAGATAAGTGGATCTAGTAGCAGGTTCTCCTATTCTCCATCCATGGATTTACAATCATGTGGGGCATGCTCGAAGCATGTGAGCGAGAGATGTGCATTGAGCAATCAGAAATTCATTGCGAGCAATGACCTCTCAGTTGTTGCTGTGTTGGTGTGTGGACATGTTTATCATGCTGAGTGCTTAGAAACGATGACAGCAGAGGCAGATAAGTACGACCCTGTTTGTCCAGTTTGTACAATAAATGGGGAGAAGCAAGAGTCCAAGTTGTCCAGAAAAGGTGTCTGTAGGGAAGCAGAGATGAAGGCCAAAAACCACAAAATATCCAAAAATCGGGTGGTTGACAGCTATGTCGAGGGCggatttgatgtgtttgatgATAGGCAAAAAGAATTAGAAAGTGGAAATGGAGGaagagaaaattttgaaaagatggAGGCTAGTTGCAGCTCAAGGTCAAGGAGCTCAtctggaattggaattggaaagCCCTTCTTGAAGAGGCACTTTTCACTTGGATCCAAGAAGGGCTTTTGGTCAAGATATCCTAAAGCTTGA 1827 0.4056 MELSSGNSWVSTKIQSSGSEEDLQVLMDQRKRKRMQSNRESAKRSRMRKQKHLDDLMAQVNELRKENSEILSSISITTQRFLNVESENSILRARMVELSHRLQSLNDILNYINTTAGVYESDHTYLFPDNFINIPFLNQPIMASADIFQCNLYFLHKLIRLSLCMSATIMGSACCVAAKDQTLPNKNGNENLHRNVTCSPSWSFQWDSQGRVAGEIENPSYHMSHGVRRNAGMELKELSSHERANLSDGGITLENPVTPNSQKSPVHEASIANLMIPSSDMSNTSNCSTVVNNPSESPEIAESSLPNLPFSIPSVLSTPGDPLPIHKYHHLPNSVPSRWAHCSPGHPLLRQISDSWILGLKSQDNSISEGRPSFVLSSCSNDMAAGSQGGSSDGWSMRTFSELVASSQRERWSFDIEYFGSGHGKISGSSSRFSYSPSMDLQSCGACSKHVSERCALSNQKFIASNDLSVVAVLVCGHVYHAECLETMTAEADKYDPVCPVCTINGEKQESKLSRKGVCREAEMKAKNHKISKNRVVDSYVEGGFDVFDDRQKELESGNGGRENFEKMEASCSSRSRSSSGIGIGKPFLKRHFSLGSKKGFWSRYPKA 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0196 608 MobiDBLite consensus disorder prediction 246 265 - -
Sto5g0196 608 Gene3D - 28 80 - -
Sto5g0196 608 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Sto5g0196 608 ProSiteProfiles Zinc finger RING-type profile. 444 503 IPR001841 -
Sto5g0196 608 MobiDBLite consensus disorder prediction 1 23 - -
Sto5g0196 608 PANTHER EXPRESSED PROTEIN 170 604 - -
Sto5g0196 608 MobiDBLite consensus disorder prediction 251 265 - -
Sto5g0196 608 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 170 604 - -
Sto5g0196 608 MobiDBLite consensus disorder prediction 1 51 - -
Sto5g0196 608 MobiDBLite consensus disorder prediction 555 587 - -
Sto5g0196 608 MobiDBLite consensus disorder prediction 282 302 - -
Sto5g0196 608 MobiDBLite consensus disorder prediction 24 51 - -
Sto5g0196 608 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Sto5g0196 608 Coils Coil 46 73 - -
Sto5g0196 608 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 430 505 IPR013083 -
Sto5g0196 608 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Sto5g0196 608 SUPERFAMILY RING/U-box 443 504 - -
Sto5g0196 608 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Sto5g0196 608 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Sto5g0196 608 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0196 Sto-Chr5 1165626 1171879 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto5g0196 bZIP_1 1.5e-08 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0196 5 1165626 1171879 Sto5g0196 5 1165626 1171879 ECH