Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0189 ATGAAAAGCAGCTCAGTTTCGAAGCTGCTACTATTCTTCTTCACCGTCTTGTTCTGCTGTTCTGAGCTCACTCACTCCACTGTAACCTACGATAGAAAGGCCATCATCATCAATGGCCAACGCAAAATTCTCCTTTCCGGCTCCATTCACTATCCCAGAAGCACTCAACAAATGTGGGAGGATCTTATTCGAAAGGCTAAAGATGGAGGCCTCGATGTCATTGACACTTATGTCTTCTGGAATTACAATTTTGAAGGGAGATACGATCTAGTGCAGTTCATTAAGACGGTGCAGAAAGTGGGGCTCTATGCTCATCTTCGCATTGGACCTTATGTGTGCGCTGAGTGGAACTATGGAGGATTTCCTGTTTGGTTAAAGTATGTTCCTGGCATCAGCTTCAGAACAGATAATGGACCTTTCAAGGCAGCAATGCTTGGCTTCACcaagaaaattgtgcagatgatgaaaaatgaaaaactaTTTCAATCTCAGGGTGGTCCAATCATTCTTTCCCAGATTGAGAACGAGTATGGACCAGAAAGTAAGGCACTAGGAGCTGCTGGACGTTCATACATAAATTGGGCTGCAAATATGGCAGTTGGATTGGATACAGGAGTTCCCTGGGTGATGTGCAAGGAAGATGACGCCCCAGATGCTGTGATAAATGCGTGTAATGGTTTTTACTGTGATTATTTCTCTCCAAATAAACCATACAAGCCTACCATGTGGACCGAGTCTTGGAGTGGCTGGTTTACAGAATTTGGTGGTCCAAATTATCAGCGACCAGTTCAAGATCTAGCATTTGCAGTTGCTCGTTTCATACAAAAGGGTGGTTCTTATGTCAATTATTACATGTACCATGGAGGTACTAACTTTGGACGCTCTGCTGGAGGCCCATTCATTACTACAAGCTATGACTATGATGCCCCTATTGATGAATATGGTTTGATCAGGGAACCTAAATATGGTCATTTGAAAGAGCTTCATAAAGCTATTAAGCTATGTGAACATGCTTTGGTGTCTTCAGATCCCACTGTTACTTCATTAGGAACGTATCAGCAGGCTCATGTATTCAATTCAGGAACCAGAACATGTGCAGCTTTTCTTGCAAACTATCATTCAAAGTCTACTGCGAGAGTAACATTCAATAACAATCACTACGATTTGCCTCCTTGGTCTATAAGCATCCTTCCTGATTGCAGAACTGTAGTACACAATACTGCAAATGTGAGAGTTGAAACATCAGAGATACAAATGTTGCCTACAAATTCCAAGTTGTTCAAATGGGAGACCTATGATGAAGATCTATCAACCCTAGCAGAAACCTCAAGGATAACAGCTGCTGGACTCTTAGAACAGATCAACGTTACCAGAGATACTAGTGACTATCTATGGTACATTACCAGTGTTGACATAAACCCTTCAGAATCGTTCCTCCGAGGTGGACAAAATCCCAGCATTAGTGTGGAATCAGCTGGCCATGCTGTGCATGTGTTTGTTAATAGGCAATTTATAGGGTCAGCTTTTGGGACAAGGGAAGAAACTAGCTGCACATTTAATGGTCCAGTCAATCTACGTGCTGGAACTAATAAAATTGCCCTTCTCAGTGTAGCTGTCGGATTACCGAATGTTGGGCTGCATTATGAGACATGGAAGACAGGGATCAATGGTCCAGTTTTGCTGCATGGTCTTGACCAGGGAAACAAAGACCTAACGTGGCAACAATGGTCTTACCAAATCGGCCTCAAAGGAGAGGCTATGAATTTGGTGTCTCCCAATGGAGTCTCATCTGTTGAGTGGGTACAAGAGTCTCTAGCTACCCAAACCCAGCAACAACTGAAATGGTACAAGGCTTATTTCGACGCACCCGAAGGAAACGAACCATTGGGTCTGGACATGGGGAGTATGGGAAAGGGTCAAGTATGGATCAATGGTGAAAGCATAGGAAGATATTGGATGGCTTATGCAAAGGGTGAATGTAATTCTTGCACCTATTCTGGCACTTACCGCTCCACTAATTGCCAACTTGGTTGTGGACAACCCACCCAAAGATGGTATCACGTTCCAAGGTCCTGGTTAAAGCCAACCAACAACTTGATTGTAGTTTTTGAAGAATTGGGCGGAGATCCTCGAAAAATATCTCTGCACAAGCGAACCTTGCATGCACCTGCATCTGCTGCTCAATCCCATTCAAAGAATTGA 2202 0.4292 MKSSSVSKLLLFFFTVLFCCSELTHSTVTYDRKAIIINGQRKILLSGSIHYPRSTQQMWEDLIRKAKDGGLDVIDTYVFWNYNFEGRYDLVQFIKTVQKVGLYAHLRIGPYVCAEWNYGGFPVWLKYVPGISFRTDNGPFKAAMLGFTKKIVQMMKNEKLFQSQGGPIILSQIENEYGPESKALGAAGRSYINWAANMAVGLDTGVPWVMCKEDDAPDAVINACNGFYCDYFSPNKPYKPTMWTESWSGWFTEFGGPNYQRPVQDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYGHLKELHKAIKLCEHALVSSDPTVTSLGTYQQAHVFNSGTRTCAAFLANYHSKSTARVTFNNNHYDLPPWSISILPDCRTVVHNTANVRVETSEIQMLPTNSKLFKWETYDEDLSTLAETSRITAAGLLEQINVTRDTSDYLWYITSVDINPSESFLRGGQNPSISVESAGHAVHVFVNRQFIGSAFGTREETSCTFNGPVNLRAGTNKIALLSVAVGLPNVGLHYETWKTGINGPVLLHGLDQGNKDLTWQQWSYQIGLKGEAMNLVSPNGVSSVEWVQESLATQTQQQLKWYKAYFDAPEGNEPLGLDMGSMGKGQVWINGESIGRYWMAYAKGECNSCTYSGTYRSTNCQLGCGQPTQRWYHVPRSWLKPTNNLIVVFEELGGDPRKISLHKRTLHAPASAAQSHSKN 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0189 733 SUPERFAMILY Galactose-binding domain-like 394 565 IPR008979 -
Sto5g0189 733 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 165 177 IPR019801 GO:0004553|GO:0005975
Sto5g0189 733 SUPERFAMILY (Trans)glycosidases 24 336 IPR017853 -
Sto5g0189 733 Pfam Beta-sandwich domain in beta galactosidase 339 410 IPR041392 -
Sto5g0189 733 PANTHER BETA-GALACTOSIDASE 3 725 - -
Sto5g0189 733 Gene3D Glycosidases 21 335 - -
Sto5g0189 733 Gene3D - 433 578 - -
Sto5g0189 733 SUPERFAMILY Galactose-binding domain-like 574 721 IPR008979 -
Sto5g0189 733 PANTHER BETA-GALACTOSIDASE RELATED 3 725 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 Pfam Glycosyl hydrolases family 35 35 331 IPR031330 -
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 163 178 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 242 257 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 279 294 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 299 315 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 611 625 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 PRINTS Glycosyl hydrolase family 35 signature 638 654 IPR001944 GO:0004553|GO:0005975
Sto5g0189 733 Gene3D - 586 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0189 Sto-Chr5 1115177 1119212 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0189 5 1115177 1119212 Sto9g3661 9 35076366 35080700 CCT
Sto5g0189 5 1115177 1119212 Sto11g1516 11 14359397 14363823 ECH
Sto5g0189 5 1115177 1119212 Sto5g0189 5 1115177 1119212 ECH