Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0185 ATGGTGTCTTTAATTTCTCCACCATCGTCACCTTCATTTCCCAGCATTCGTTTTCGTGAAACTTCCTTTTTCTCCACTCGCTTGCTTCCACAAAGGGGTATTCAACAGAGAAGCAATTCCGAAAATTATAGATGGTATACGGTTAAGTGCAGACTTCTCAGCGCCAATGTGTCTCCGTCGTCAAGCCCTTCTACAGTGATCAAGGAACCTCACAAGTATTTTGATCAGGTAATAATCACAGTTCGTTCAGGTGATGGAGGCCATGGAGCAATACTTAGTATGCCCAACCAGAGAGTTAATAGTTCAAAAGGAAAACAGGAAAAGGAAAAGACGAGGAAGAAAAGCTCATTTAGAAGGGACTTTGATGGATCACTTATCCTACCTACGGGTGGGCATGGAGGGGATGTGGTGATTTATGCAGATGAGGGAAAAGATTCATTATTGGAATTCCACAAGAAAAGCCGCTATAATGCAAAGCGTGGTGGCAATGTGGATGCAATGGGTGTTTTGACCTCACAATTGCGTGATGGACTTGCTTCCCCAACTTTGCGCATTCCTGTTCCTCAAGAAGTTATTAGGTACATTACCCGTGCTTTCAAATTTGGGACATTTGATGAACAATATCTGCTTTCTCTCATAGAGTTTACTGATATGACAGGTACAGTTGTAAAACATAAACGAGGCAAATTGCTGGCTGATCTGGCACAACCAGGTGATGAAATTCTTGTTGCGAGGGGTGGCCAAGGAGGGATTAGCTTGTTAGAAACGCCTCAGCATAATAGGAAAAAGATGATGGCTTTGACAACAAATGTGATGAGAGATGAGACTGATaagGTTTTAGTTCTTGGTCAACCTGGTGAGGAAGTTAGTTTGGAGTTGATACTACGAGTTGTTGCTGATGTTGGTCTAGTTggaCTTCCAAATGCTGGGAAATCAACACTTCTGGCAGCCATTACTCTTGCAAAACCTGACATTGCTGATTATCCTTTCACAACATTAATGCCAAACCTTGGACGCCTTGGTGGTGACCCCAACTTGGGGGCTGAGATGTATTCATCTGAAGCTACATTAGCAGATTTGCCTGGTCTTATAGAAGGTGCTCACTTAGGAAAGGGTCTTGGTCGCAATTTCTTGAGGCACCTCAGGAGGACCCGGCTACTGGTCCATGTTGTTGATGCAGCCACTGAGAACCCCTTAAATGACTACAGAACTGTCAGGGAAAAAGTTATCTGTGATCAGCTTTTCTTGTCCTTTTCTTGGAGTTATCTTGCTCATGCTATGGTCTCCATGGGAATTCTGTTCTTGCAGGAATTGCGAATGTATAATCCCGAGTACCTTGAACGACCATACATTGTGGTTTTAAATAAGATTGACCTTCCAGAGGCAAAGGCCAGGCTTCCATCATTAACTGAAGAAATACAGAGAATTGGGAGTGTTGGTACACATTCTGAACCAAAATTGAGCTCTGAAGCTCCAGTTCAATCATTATCCAATGAAGGTGACATAAAGGAAAGGAAGCTGGAGGATTATCCACCACCCCTCTCTGTTGTGGGAGTTAGTGTGCTAAAGGGCAACAAgatagatgatatgttaaaggAAATAAGGGCAGGTTTAAGGAAATGTATGGATTCCAAAGAAGCATCATCGCTCTGA 1653 0.4253 MVSLISPPSSPSFPSIRFRETSFFSTRLLPQRGIQQRSNSENYRWYTVKCRLLSANVSPSSSPSTVIKEPHKYFDQVIITVRSGDGGHGAILSMPNQRVNSSKGKQEKEKTRKKSSFRRDFDGSLILPTGGHGGDVVIYADEGKDSLLEFHKKSRYNAKRGGNVDAMGVLTSQLRDGLASPTLRIPVPQEVIRYITRAFKFGTFDEQYLLSLIEFTDMTGTVVKHKRGKLLADLAQPGDEILVARGGQGGISLLETPQHNRKKMMALTTNVMRDETDKVLVLGQPGEEVSLELILRVVADVGLVGLPNAGKSTLLAAITLAKPDIADYPFTTLMPNLGRLGGDPNLGAEMYSSEATLADLPGLIEGAHLGKGLGRNFLRHLRRTRLLVHVVDAATENPLNDYRTVREKVICDQLFLSFSWSYLAHAMVSMGILFLQELRMYNPEYLERPYIVVLNKIDLPEAKARLPSLTEEIQRIGSVGTHSEPKLSSEAPVQSLSNEGDIKERKLEDYPPPLSVVGVSVLKGNKIDDMLKEIRAGLRKCMDSKEASSL 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0185 550 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 48 189 - -
Sto5g0185 550 PANTHER GTP-BINDING PROTEIN OBGC2-RELATED 219 547 - -
Sto5g0185 550 ProSiteProfiles Obg domain profile. 71 298 IPR006169 -
Sto5g0185 550 SUPERFAMILY Obg GTP-binding protein N-terminal domain 73 262 IPR036726 -
Sto5g0185 550 MobiDBLite consensus disorder prediction 89 116 - -
Sto5g0185 550 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 299 539 IPR031167 GO:0005525
Sto5g0185 550 Gene3D GTP1/OBG domain 72 297 IPR036726 -
Sto5g0185 550 Pfam 50S ribosome-binding GTPase 300 408 IPR006073 GO:0005525
Sto5g0185 550 Gene3D - 299 546 IPR027417 -
Sto5g0185 550 MobiDBLite consensus disorder prediction 480 496 - -
Sto5g0185 550 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 219 547 IPR045086 GO:0003924|GO:0005525
Sto5g0185 550 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 48 189 IPR045086 GO:0003924|GO:0005525
Sto5g0185 550 MobiDBLite consensus disorder prediction 102 116 - -
Sto5g0185 550 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 300 538 IPR027417 -
Sto5g0185 550 ProSitePatterns GTP1/OBG family signature. 359 372 IPR006074 GO:0005525
Sto5g0185 550 MobiDBLite consensus disorder prediction 480 504 - -
Sto5g0185 550 PRINTS GTP1/OBG GTP-binding protein family signature 301 321 IPR006073 GO:0005525
Sto5g0185 550 PRINTS GTP1/OBG GTP-binding protein family signature 322 340 IPR006073 GO:0005525
Sto5g0185 550 PRINTS GTP1/OBG GTP-binding protein family signature 357 372 IPR006073 GO:0005525
Sto5g0185 550 PRINTS GTP1/OBG GTP-binding protein family signature 374 392 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0185 Sto-Chr5 1096935 1101427 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0185 5 1096935 1101427 Sto5g0185 5 1096935 1101427 ECH