Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0184 ATGCTGAAATCGGGGATGGGAATTGAGGAGCGAAAGCAGGTGAAAAGGCCTGCTCAAGCCAGCTCCAGAAAAGGGTGTATGAGAGGCAAAGGTGGCCCAGAAAACGCAAGCTGCACCTACAAAGGCGTTCGACAGCGAACCTGGGGCAAATGGGTGGCCGAAATCCGCGAACCCAACCGTGGGGCCCGTCTCTGGCTCGGCACTTTCGAAACTTCGCACGAAGCTGCTTTGGCTTATGATGCTGCTGCTCGCAAGCTCTATGGTTCTGAGGCCAAGCTCAATCTCCCTGACCTCTCTCTCAACTCCCAATCCCAATCCCCACCCAACATCCCAATTCACCATCCTCATCACCTTCTTCACACTCACAACTCCCCCCTTCCTCCACCCTGCACCTTCAATTCCATGACGACCCCCACTAACAGTACCAACCCTATGATCTCCATGCCTTCCCATCAATCAATTGGGCCTAATTCTACCTCCACTACTTCTGCTTCTGCCCTGTCTCACTCTGTTCCGTTGGAGAAGGAGGAGGATTTTACTCAGTTCTGGGGGACAATGAACGACAACCTCCCCGTGCCTGAGCCTGAGTTTGACGATTCCATCTGGGCAGAAGCCGCCTTGTCTCTGGATTTTCCGGTCATGCCTGATGCTGCCAATGCCATATACGCCACTCCCAATTTTGGAGATGTGGCTTCCACCTGGGACACTATGCAAACTCCCTGGCAGCTCTTGTCCTGTAAAGTATTGATCGTCTTATATAGTGAGCTACTAGgcggagaaaaagagagagtggCATCCAGTAATAAGGAGGGAATGGCATCAAGTAGTTTAGTAAGCAATGGATGCGTGGATGTCCGCGGCAGGATTGCTGACAAGAAAACAACAGGAGGATGGAAGGCGTCTCCGTTTATCatagTGAACGAGGTTGCAGAGAGGTTAGCATTCTTCGCAATTGCAGTAAACATGGTGAGTTATTTGGTGCTTGAAATGCATCAGTCCCTTCCAGACGCTGCCACCCATGTCACTGATTGGATTGGAGCTGCCTTTGTTCTTACACTCTTTGGAGCCTTCTTAGCTGATGCTTACTTGGGTCGTTTCAAAACCATTATCCTCTTTTCTGCCGTCTATGCCCTCGGGATGATACTACTGACGGTGTCGGCCCGCCTAGAAAGCCTACGTCCGCCTGCGTGCACAGTGCCACCCTGCCAAGAAGCAACCCAAGCCCAAACCGCATTCCTATACGTAGCACTCGCTCTCATTGCTCTTGGAACGGGTGGGATTAAGCCATGTGTCTCCTCCTTTGGTGCTGATCAATTCGACGAGGGAGATCAAACGGAAGTCTTGAACAAATATGCTTTCTTCAACTGGTTCTTCTTCGCCATCAACATGGGTGCCCTCCTTGGAATCACCCTTATAGTTTACATTCAAGACAAATATGGATGGAGCTGGGGATTCGGTGTCCCAACCGTCGCTATGATCTGCTCCGTCCTCATCATTCTCTCTGGTATCCCCTTTTACCGTTATAAAAAACCCATGGGAAGCCCTTTCACCAGGTTCCTTCAGGTCATGGTAGCCTCCCTCAGGAACCATCTCAAGGCCAAGGGCGTCACCCAAACTGACGACCTCTATGAAGTTACAACCGCACATTCTGATATAATGGGTGCTCGCAAGCTTCTTCACACCCCACAGTTTCTGGACAAAGCGGCGGTTATAACAGAATCAGAGGGAGAGGAGAGAAGCAACCGGTGGCGTATATGCACAGTGACGCAAGTGGAGGAACTGAAATCGTTCATAAGAGTGCTTCCGGTGTGGGGGGCCACAATTGCTCTTTCGGTGTCGTTTGCTCAGCTCTCAACCTTCTTTATAAGCCAAGCCCGCATCATGGACCGATGGCTAGGACCCAATTTCGAAATCCCCGCGGGGTCCGTACCTGTGTTCGGCTCCATGAATGCTCTCATTCTGGTGCCCATCTACGAGAAATACATGGTCCCTATTCTTCGAAAGTACACAAGCCACCACCGAGGCCTAACATCCTTACAGCGAATGGGGGTGGGCCTATTTGTGTCCATCTTCGCTATGGTTTGGGCCGCTTTGGTAGAGAAGAAACGACGCCACCATTTCTCTTCCTCAATGAGCGTCTTCTGGTTGCTTCCTCAGTTCTTCCTCATTGGCACTGCGGAGGTTTTCACATATGTGGGACAGCTGGAGTTCTTCTACGATGAAGCCACGGATGGGACGAGGAGCATTAGTAGTGCCATGTTTCTTTCTGAGATTGGGATTGGAAGCTGGTTAAGCACTGCCTTGGTCAACATCATTCAGGCTTCCACGGGTGGTCAACGCAATGGCTGGCTCAGAAACGATCTTAATCAGAGCAAGTTGGACTATTTTTATTGGATACTGGCTGCCATTAATGGGCTCAATTTCTTGGTTTACTTGATGGTGGCATGCCGTTACAAAGGCAAACTGGCTACTTCTAATGTTGCAGATGTCGCCATAGTTGAATTCAGCAACAAGCCCAGCCCACAACGGGATTTCCAAAGCCTTGTCATCtcataa 2556 0.4992 MLKSGMGIEERKQVKRPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGSEAKLNLPDLSLNSQSQSPPNIPIHHPHHLLHTHNSPLPPPCTFNSMTTPTNSTNPMISMPSHQSIGPNSTSTTSASALSHSVPLEKEEDFTQFWGTMNDNLPVPEPEFDDSIWAEAALSLDFPVMPDAANAIYATPNFGDVASTWDTMQTPWQLLSCKVLIVLYSELLGGEKERVASSNKEGMASSSLVSNGCVDVRGRIADKKTTGGWKASPFIIVNEVAERLAFFAIAVNMVSYLVLEMHQSLPDAATHVTDWIGAAFVLTLFGAFLADAYLGRFKTIILFSAVYALGMILLTVSARLESLRPPACTVPPCQEATQAQTAFLYVALALIALGTGGIKPCVSSFGADQFDEGDQTEVLNKYAFFNWFFFAINMGALLGITLIVYIQDKYGWSWGFGVPTVAMICSVLIILSGIPFYRYKKPMGSPFTRFLQVMVASLRNHLKAKGVTQTDDLYEVTTAHSDIMGARKLLHTPQFLDKAAVITESEGEERSNRWRICTVTQVEELKSFIRVLPVWGATIALSVSFAQLSTFFISQARIMDRWLGPNFEIPAGSVPVFGSMNALILVPIYEKYMVPILRKYTSHHRGLTSLQRMGVGLFVSIFAMVWAALVEKKRRHHFSSSMSVFWLLPQFFLIGTAEVFTYVGQLEFFYDEATDGTRSISSAMFLSEIGIGSWLSTALVNIIQASTGGQRNGWLRNDLNQSKLDYFYWILAAINGLNFLVYLMVACRYKGKLATSNVADVAIVEFSNKPSPQRDFQSLVIS 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0184 851 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Sto5g0184 851 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Sto5g0184 851 Gene3D MFS general substrate transporter like domains 271 825 IPR036259 -
Sto5g0184 851 CDD MFS_NPF 302 815 - -
Sto5g0184 851 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 268 830 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto5g0184 851 MobiDBLite consensus disorder prediction 1 38 - -
Sto5g0184 851 SUPERFAMILY MFS general substrate transporter 296 820 IPR036259 -
Sto5g0184 851 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Sto5g0184 851 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Sto5g0184 851 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Sto5g0184 851 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Sto5g0184 851 PANTHER PEPTIDE TRANSPORTER 268 830 - -
Sto5g0184 851 MobiDBLite consensus disorder prediction 148 168 - -
Sto5g0184 851 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 355 379 IPR018456 GO:0006857|GO:0016020|GO:0022857
Sto5g0184 851 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Sto5g0184 851 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 2. 454 466 IPR018456 GO:0006857|GO:0016020|GO:0022857
Sto5g0184 851 MobiDBLite consensus disorder prediction 1 17 - -
Sto5g0184 851 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Sto5g0184 851 Pfam POT family 366 779 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0184 Sto-Chr5 1083480 1095056 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sto5g0184 PTR2 7.3e-106 CL0015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0184 5 1083480 1095056 Sto5g0184 5 1083480 1095056 ECH