Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0179 ATGGGTCGCCACTCGCTCTTGGCTTTACTCCTCTTGTCCCTCCTATCCGTGGCGGTGGCAACAGCCGAGTTCGACGACGATGACCTTCTAATCCGACAGGTCGTTTCGGACGGCGAGGATCACTTGCTTAACGCCGAGCATCACTTCTCCAACTTCAAGACCAAGTTCGGCAAGACTTACGCTACAAGAGAGGAGCACGACTACCGCTTTGGTGTCTTCAAGGCTAACTTGCTCCGAGCCAAGTTGCACCAGAATCTTGATCCCTCCGCCGCCCACGGCGTCACCAAATTCTCCGATCTTACTCACTCCGAATTTAGCCAGCAGTTCCTCGGCCTTAAGCCTCTTCGTCTTCCCGCTGATGCTCGCAAGGCTCCGATCCTCCCTACCAACGATCTCCCTACTGATTTCGACTGGCGTGATCATGGAGCCGTCACTCCCGGCTCATGTGGATCATGCTGGTCATTTAGCGCTACAGGAGCCCTAGAAGGAGCTCATTTTCTATCTACTGGAAAGCTAGAGAGCCTTAGTGAGCAACAGCTCGTAGATTGTGATCACGAGTGTGATCCGGAACAATATGGAGCATGTGATTCAGGTTGTAATGGTGGGTTGATGACCTCTGCATTTGAGTACACACTCAAGGCTGGGGGTTTAGAACGAGAAGAGGACTATCCTTACACTGGAACAGACCGTGGCCCATGCAAATTTGATAAAAGCAAAATTGCTGCTTCTGTATCTAATTTCAGTGTGGTTTCCATTGATGAAGATCAAATTGCTGCAAATCTGGTGAAGAATGGTCCTCTTGCAGTTGGTATCAATGCAGTTTTTATGCAGACATATATTGGCGGCGTTTCATGCCCATTCATCTGCACAAAGCGTTTGGATCATGGGGTTCTTTTAGTGGGATATGGCTCTGCTGGGTATGCTCCCATTCGATTTAAGGAAAAACCTTACTGGATTATTAAGAATTCATGGGGACAGAACTGGGGAGATGATGGATACTACAAGATCTGCAGAGGTCGAAATATATGTGGGGTGGATTCCATGGTCTCAACAGTTGCTGCAATACATACTTCTAGTGAATAA 1083 0.4848 MGRHSLLALLLLSLLSVAVATAEFDDDDLLIRQVVSDGEDHLLNAEHHFSNFKTKFGKTYATREEHDYRFGVFKANLLRAKLHQNLDPSAAHGVTKFSDLTHSEFSQQFLGLKPLRLPADARKAPILPTNDLPTDFDWRDHGAVTPGSCGSCWSFSATGALEGAHFLSTGKLESLSEQQLVDCDHECDPEQYGACDSGCNGGLMTSAFEYTLKAGGLEREEDYPYTGTDRGPCKFDKSKIAASVSNFSVVSIDEDQIAANLVKNGPLAVGINAVFMQTYIGGVSCPFICTKRLDHGVLLVGYGSAGYAPIRFKEKPYWIIKNSWGQNWGDDGYYKICRGRNICGVDSMVSTVAAIHTSSE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0179 360 CDD Peptidase_C1A 133 352 IPR039417 -
Sto5g0179 360 Pfam Cathepsin propeptide inhibitor domain (I29) 49 105 IPR013201 -
Sto5g0179 360 Pfam Papain family cysteine protease 132 351 IPR000668 GO:0006508|GO:0008234
Sto5g0179 360 Gene3D Cysteine proteinases 25 353 - -
Sto5g0179 360 PRINTS Papain cysteine protease (C1) family signature 146 161 IPR000668 GO:0006508|GO:0008234
Sto5g0179 360 PRINTS Papain cysteine protease (C1) family signature 295 305 IPR000668 GO:0006508|GO:0008234
Sto5g0179 360 PRINTS Papain cysteine protease (C1) family signature 317 323 IPR000668 GO:0006508|GO:0008234
Sto5g0179 360 SUPERFAMILY Cysteine proteinases 46 352 IPR038765 -
Sto5g0179 360 PANTHER CYSTEINE PROTEASE RD19C-RELATED 23 354 - -
Sto5g0179 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 317 336 IPR025661 -
Sto5g0179 360 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 293 303 IPR025660 -
Sto5g0179 360 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 354 - -
Sto5g0179 360 SMART Inhibitor_I29_2 49 105 IPR013201 -
Sto5g0179 360 SMART pept_c1 132 353 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0179 Sto-Chr5 1054663 1056550 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0179 5 1054663 1056550 Sto9g3666 9 35108986 35109480 CCT
Sto5g0179 5 1054663 1056550 Sto5g0179 5 1054663 1056550 ECH