Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0167 ATGGATGCCGCAGTGAAGAGGTCTGGGACCAAGAAAAGATCGAAACAGTTGGAAGTTGGAGTTGATTCGGATGATGACGAGCCCATTGGGTCTATGTTTAAGGTGAGGAGGCCTCGTAACTTGAAGAAGGTTAACTCAGCATTAAAAGGCATTAGTGATATCCAGAATTCTGACCCTATCGGGAAGAAATTAATTGCTGAAGAAGAAGACTCAGGGGGTATGGATGATACTTTGGCTAGTTTTAGGAAAAGATTGAAGGGTCCAAAGAGAGATAAGGGATCTGGAACCACCAAAGGAAGAAATTCTGCTTTGAGTGTGTTTACTGATAGTTCTTTGGATGTTTCATCTGAGGGTGGGGTTTTGGATAATGTCAAGAAAGTGCAGGCTGTGGGTGATAATGGATCTGATATGACTAAGGATATCATAGTAGATGGGAGCAGTGAAGGAAAGGTGGAGAGACCTCATATGGATCTGCTACCGGATGGCATTGGGGGTCATACGACATCTAATGGGGATTTGGAAGCTCAAGGATCTAGGAGTACATTTAATGAAGAGAAAGGGGTGGTTTTATTGTCTGGCAATGTTTTGCAGCACCCTTCTGATGGAAAGAAGGAAGACTCATTGTCAACGATTTTCCAAAATGCacaatctaatttaattaggaTATCACATACCTCTTCAATTTCAAAGCAGAAAAATGGGAGTCAGATTGTCGATGATGGGTTGAGAGCTGTTTCAAAAAATGTTCCAGAAACTGTAGAGTCTAAAGCTGAATGTAGATCTAAATCTTCTTCTACCTCCAAAATAGGTGGAAGAATTTTGAAATCTGCTAATGATTTGCCTCAAGGATCTGATTTGCATTCATTTGCTTCAGCATCTGTAATGGATAATAAAACTTTTGATAGTGGCTATCTTCAAGAGGAAAATTCCAAGGGCATTTGTGTTTCAAACATTCAAACTGGGCCCAGAGTTGATCACTCTCTCTCAATCAATGCCTGCAATGGAGATAGCCAGCAATTGTCTTCTGTTCATCTTGGAGATGATTGCTCTCTGTCCGGTCAAATGGTTACAGTTCAAGAAAGATTTGTCAATGATGGTTTGAAGCAGTGCTCTATTATGTTGCAAGGTGTTGAAGAAATGGTTGACACTACCTCTCTCCCAAAAGCGGGGGAAGGGGTATGTGGCCTTAATCAGGGCGAGTTCAAGGAAAATTTAACAGATAAACTAGTTCTAGTTTGTAATGGTAGTACAGGAAATGCTTTTTCCATGGAGAAAGAAATTGCCTTACCTCCTTCAGACACCCTGCCCTTAAATAGATTGTGTGAAGATTTACTGAATGGGAATAATCAGCTGGTTTCTGAGGAAGTTGTGGAGGGATCCTCCAAAAATGGAGCTATAAAATTCTCTGGATTCCATGCAGAAGTAGATGGTGTTGGGAAATCTGAATCTGAGTTGGTTTCTAGTAGAATTTCCAGTGATTGCAATAGTCTAGATCCAAAGGCTGAGCTGCAAAATGCTGTATTTTCTGACGGTAACTTACCTCCAACAATGTCAAATGAGGCCAATGAAAATAAATTGGCTGTCCAGTCAAATCTCTCAGTGAAACCTTTGAAAAGTTCTAGCATTATAAATGATTCTAATGCATCAATTCAGAAGAGCAGCTCAGTATTACATCGAGTTCAACCTTCTGACGATACATCTGAAGAGGGATGTCTTCCTAATGATACGATATCAGCTGTTCAGCGTGCCATGCGTAAGCCCAAAAAGCGTAGGCATGGAGACATGGCTTATGAGGGGGATGCTGATTGGGATATTTTAACAAGTGACCAATCTTTTCTTGAAAGTCAAGGTGTTGTGGATAATGGCCACACTCTCAGACCAAGAGTGAAGCTTGATTGCTCTTTGAATGTTGTTGAAGAGTCTGAAAGTGTTGCAGCAGCAGTATCAGCTGGTCTGAAAGCCCATGCAGCTGGTCCAGTTGAAAAGATAAGGTTTAAGGAGATCTTGAAGCGTAAAGGTGGTCTCCAGGACTATTTGGACTGCAGAAATCAGATCCTAAGTATTTGGAGCAAGGATGTCACACGTATTTTGCCTCTTTCTGACTGTGGAGTTAGTGATACACCTTGTGAGGATGAATCTCCTCGTTCTTCCCTTATCAGGGAAGTCTATGCATTTCTTGATCAATGTGGTTATATAAATGTTGGGATCGCCTCTCAGAAGAATTCTGGAACCAGTGCAGGGCATAAttgtaaaattgtaaaagaagaaGGGTTTGTGAACAGTTCCACTGCTTCCATGGCTGACTCTGAAGATGGAGTTTCCTTCATTGTGGGTCAGGCTAATAGGTCAGATACTTCCATGAAGACTAAGGATGGCCTTAAAGTTGATTATGAAGAATTGGCACCTGTAGCTACAGAAGGCGGAAGGTATGGTGACCCAATGAGGTTGGATTTATTAAACATGACGCAgcatgaagaaagaaaaaatgattACCCGGAAAATGGTGGGATTCAGGAAGGTTTAAGTGGACTCGTATACATTAACAGTTCTGATCCTTCTACCAATGATTCTGATTGTAGAATGACTTCTGTTGTAGCTACTGAGCGAAGCCATGAATCTACCTGTGGTAAATCTTCTTTAGATGATCAGATACCTGATCCCTTGCAGTCTGATTCAGAGGCCAGAAAGAGAGTGATTGTCATAGGAGCTGGTCCTGCAGGGTTAACTGCTGCTCGCCACTTGCAACGTCAGGGTTTTTCTGTAACTATACTTGAGGCTCGGAGTAGAATAGGAGGTCGGGTCTTTACTGATCGTTCTTCTCTATCTGTTCCTGTGGATCTTGGTGCTAGCATTATCACTGGTGTTGAGGCTGATGTCGCTACTGAGAGAAGACCAGATCCTTCATCATTGGTTTGTGCTCAATTGGGCCTTGAGTTGACTGTGCTAAACAGTGATTGCCCCCTTTATGACATAGTAACTGGACAAAAGGTTCCTACAGACCTGGATGAAGCATTGGAAGCTGAATATAATAGTCTTCTTGATGACATGGTTTTGCTTGTCGCTCATAAGGGTGAACAAGCAATGAAAATGTCTCTAGAAGAGGGTTTAGAATATGCTCTAATGAGGCGTCGTATGACACGCTCTGGGAGAAGTAGTGAAGATTTTGAGTCCACTAGAGAGGCATATCCTTCATTCAATTCAAATAGAGGCTGTACTGAGGAAAACATTAGTCAAAAGGAAATTTTGAGTCCACTTGAGAGGAGAGTTATGGATTGGCACTTTGCTAATTTGGAGTATGGTTGTGCTGCTCTTCTTAAGGAAGTTTCTCTTCCCTACTGGAATCAAGATGATGTTTATGGTGGATTTGGAGGAGCTCATTGTATGATTAAAGGGGGTTACAGCACTGTTGTTGAGTCTCTAGGACAAGGGCTTGTCATTCACATGAACCATGTTGTAACAGATGTGTCATATGGTAGAAAGGAACCTGGTCAGAGTAATATAGTCAGAGTTTTGACATCAAATGGCAATGAGTTTTTTGGAGATGCTGTCCTCATCACTATTCCCCTGGGCTGTTTGAAGGCTGAAACTATAAAATTCTCCCCACCTTTGCCACAGTGGAAATGCTCTTCTATCCAGCGTCTTGGTTTTGGAGTTCTCAATAAAGTGATTTTAGAATTTCCTAGTGTGTTTTGGGATGATGCGGTGGATTACTTTGGAGCAACATCAGAAGAAACGAGCAGAAGAGGTCAATGCTTTATGTTCTGGAATGTCAAGAAAACAGTTGGGGCTCCTGTCCTTATAGCATTAGTTGTTGGTAAGGCAGCAATAGATGGTCAATGTTTGAGCTCCTCTGATCATGTCCACCATGCACTAATGGTTCTCCGTAAACTTTTTGGGGAGGCTTCAGTACCTCATCCTGTTGCATATGTAGTGACTGATTGGGGTAGGGATCCTTTTAGCTATGGTGCTTACTCATATGTTTCTGTTGGAGCATCAGGAGAAGACTATGATATATTAGGGAGGCCAGTTGATAACTGCTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCATCCAGATACAGTTGGTGGTGCAATGATGAGTGGACTCCGGGAAGCTGTGCGTATAATTGATCTATTGAACACTGGAAATGATTATACTGCTGAAGTGGAGGTAATGGAGGCTGCACAGAGACAGTCGGATACTGAAAGGGATGAAGTTAGGGATATAATAAAGAGGCTTGACGCAGTTGAGCTTTCTAGTGTCTTGTACAAGAATTCTTTAAATGGTGCTCAAATCATAACTCGTGAAACTTTACTAAGGGACATGTTCCTTAATGCAAAAACTAGTGCTGGGCGTTTGCATGTGGCCAAACAGTTGTTGAGTTTTCCTGTTGAAAACTTGAAGTCCTTTGCTGGGACTAAAGAGGGGCTTACCATTCTCAACTCATGGATACTGGACTCTATGGGGAAGGATGGTACCCAGCTCTTGCGGCACTGTGTGCGGCTCCTTGTGCGTGTTTCAACTGATCTTCTAGCTGTGCGTGTATCAGGCATAGGGAAAACAGTGAAGGAAAAAGTGTGTGTACATACTAGCCGTGATATACGTGCTATAGCAAGCCAGTTGGTTAGTGTATGGCTTGAAATCTTCCGCAAGGCAAAAGCTTCTAATGGCGGATTGAAGTTTTCGAGACAAGCAACTGCTGCAGATttatcaaaaagaaaatctCTGAAAGATTCAGCATCAGGAAAGCCACCTCTGAGTATGCTTCATGGTGCTTCTGAGATTAAAGGAGGCTTGCTGGCTCTTGCATCTGCTGGAAGCAGTTCACCTTCCTTTGTAAATGTGAAGAAATTGGACGACAGACAAGTAAGACAACAGGAGGCAAATGATAGGCATGGAGTCAATTCTTCCAGATCCCAAGGTTCAGTAGGCAAAGCAACTACTGAGGAGGAAGACCACTCCTATGCTATGTCTGAAGAAGAACAGGCTGCCATAGTTGCAGCAGAAGCTGCCCGTGCTAAAGCACTTGCTGCTGCTGAGGTTTCTAATCCAGTTGAGATTTTGGTGAATGTGCAGGCTTATGCCTCTGCAGAAGCCAGGTGTAACACGTTGCTGCAGCTTCCGAAGATACCCTCATTCCACAAATTTGCTACACGGGAGAATTGTTCTCAAAATGATGAGTGTGATAGTAGGAAAAAGTGGTCTGGTGGGGTTTTAGGAAGGCAAGATTGTATTTCAGAGATAGATTCTAGGAATTGCAGAGTTAGGGACTGGTCTGTTGATTTTTCTGCTGCTTGTGTTAACCTTGATAATGCTAGAATGTCAATGGACAACCTATCACAGCGGAGTCATTCAAATGAGATTGCTagtcattttaattttggaGAGCACTCGGGAGAAAGTGTTGCTGTGGACAGCAGTATATATACAAAAGCATGGATTGACACAGCTAGTGGTGTAGGGATAAAAGATTATCATGCCATTGAGAGATGGCAGTCGCAAGCAGCTGCAGCTGATTCTGATTTTTCTAATCCACCCATTCATTTGAAGGATGAGGAAGAATCAAATGCCTGTTCAAGATTACCCAGCGGGAAGCTTGATTGCATGGCAAATGAGAGCTCGGTTTCACAGGTTACTGTAAATAGGGAGGCCTTAAAAAGTCACTCTCGAGGGGTAGATCGCATTAAACAGGCTGTTGTGGATTATGTTGCTTCGTTACTTATGCCCCTTTATAAGGCAAGGAAGCTAGATAAGTCTGGGTACAAGGCTATAATGAAGAAAAGTGCAACGAAGGTTTTTCACGCTTCActcttttgtttctcttttctattttctatattAGCATCTGCTACTATGGTGATGGAGCAAGCCACTGATGCAGAGAAAGCCATGGCTGTTCACGAGTTTCTAGATTTTAAGCGAAAGAACAAGATTCGCTCCTTTGTGGACAAATTGATTGAGAGACACATGGCAGTGAAACCAGAagtaaaatcttaa 6000 0.418 MDAAVKRSGTKKRSKQLEVGVDSDDDEPIGSMFKVRRPRNLKKVNSALKGISDIQNSDPIGKKLIAEEEDSGGMDDTLASFRKRLKGPKRDKGSGTTKGRNSALSVFTDSSLDVSSEGGVLDNVKKVQAVGDNGSDMTKDIIVDGSSEGKVERPHMDLLPDGIGGHTTSNGDLEAQGSRSTFNEEKGVVLLSGNVLQHPSDGKKEDSLSTIFQNAQSNLIRISHTSSISKQKNGSQIVDDGLRAVSKNVPETVESKAECRSKSSSTSKIGGRILKSANDLPQGSDLHSFASASVMDNKTFDSGYLQEENSKGICVSNIQTGPRVDHSLSINACNGDSQQLSSVHLGDDCSLSGQMVTVQERFVNDGLKQCSIMLQGVEEMVDTTSLPKAGEGVCGLNQGEFKENLTDKLVLVCNGSTGNAFSMEKEIALPPSDTLPLNRLCEDLLNGNNQLVSEEVVEGSSKNGAIKFSGFHAEVDGVGKSESELVSSRISSDCNSLDPKAELQNAVFSDGNLPPTMSNEANENKLAVQSNLSVKPLKSSSIINDSNASIQKSSSVLHRVQPSDDTSEEGCLPNDTISAVQRAMRKPKKRRHGDMAYEGDADWDILTSDQSFLESQGVVDNGHTLRPRVKLDCSLNVVEESESVAAAVSAGLKAHAAGPVEKIRFKEILKRKGGLQDYLDCRNQILSIWSKDVTRILPLSDCGVSDTPCEDESPRSSLIREVYAFLDQCGYINVGIASQKNSGTSAGHNCKIVKEEGFVNSSTASMADSEDGVSFIVGQANRSDTSMKTKDGLKVDYEELAPVATEGGRYGDPMRLDLLNMTQHEERKNDYPENGGIQEGLSGLVYINSSDPSTNDSDCRMTSVVATERSHESTCGKSSLDDQIPDPLQSDSEARKRVIVIGAGPAGLTAARHLQRQGFSVTILEARSRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSSLVCAQLGLELTVLNSDCPLYDIVTGQKVPTDLDEALEAEYNSLLDDMVLLVAHKGEQAMKMSLEEGLEYALMRRRMTRSGRSSEDFESTREAYPSFNSNRGCTEENISQKEILSPLERRVMDWHFANLEYGCAALLKEVSLPYWNQDDVYGGFGGAHCMIKGGYSTVVESLGQGLVIHMNHVVTDVSYGRKEPGQSNIVRVLTSNGNEFFGDAVLITIPLGCLKAETIKFSPPLPQWKCSSIQRLGFGVLNKVILEFPSVFWDDAVDYFGATSEETSRRGQCFMFWNVKKTVGAPVLIALVVGKAAIDGQCLSSSDHVHHALMVLRKLFGEASVPHPVAYVVTDWGRDPFSYGAYSYVSVGASGEDYDILGRPVDNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLLNTGNDYTAEVEVMEAAQRQSDTERDEVRDIIKRLDAVELSSVLYKNSLNGAQIITRETLLRDMFLNAKTSAGRLHVAKQLLSFPVENLKSFAGTKEGLTILNSWILDSMGKDGTQLLRHCVRLLVRVSTDLLAVRVSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEIFRKAKASNGGLKFSRQATAADLSKRKSLKDSASGKPPLSMLHGASEIKGGLLALASAGSSSPSFVNVKKLDDRQVRQQEANDRHGVNSSRSQGSVGKATTEEEDHSYAMSEEEQAAIVAAEAARAKALAAAEVSNPVEILVNVQAYASAEARCNTLLQLPKIPSFHKFATRENCSQNDECDSRKKWSGGVLGRQDCISEIDSRNCRVRDWSVDFSAACVNLDNARMSMDNLSQRSHSNEIASHFNFGEHSGESVAVDSSIYTKAWIDTASGVGIKDYHAIERWQSQAAAADSDFSNPPIHLKDEEESNACSRLPSGKLDCMANESSVSQVTVNREALKSHSRGVDRIKQAVVDYVASLLMPLYKARKLDKSGYKAIMKKSATKVFHASLFCFSFLFSILASATMVMEQATDAEKAMAVHEFLDFKRKNKIRSFVDKLIERHMAVKPEVKS 1999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0167 1999 Gene3D - 1004 1332 - -
Sto5g0167 1999 SUPERFAMILY FAD-linked reductases, C-terminal domain 1215 1326 - -
Sto5g0167 1999 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 567 1935 - -
Sto5g0167 1999 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 1950 1995 - -
Sto5g0167 1999 Coils Coil 1393 1413 - -
Sto5g0167 1999 MobiDBLite consensus disorder prediction 1630 1645 - -
Sto5g0167 1999 Gene3D - 898 1375 IPR036188 -
Sto5g0167 1999 MobiDBLite consensus disorder prediction 1049 1069 - -
Sto5g0167 1999 MobiDBLite consensus disorder prediction 1 33 - -
Sto5g0167 1999 MobiDBLite consensus disorder prediction 81 96 - -
Sto5g0167 1999 PRINTS Adrenodoxin reductase family signature 897 919 - -
Sto5g0167 1999 PRINTS Adrenodoxin reductase family signature 920 933 - -
Sto5g0167 1999 Gene3D - 642 745 IPR036388 -
Sto5g0167 1999 Pfam Flavin containing amine oxidoreductase 906 1377 IPR002937 GO:0016491
Sto5g0167 1999 MobiDBLite consensus disorder prediction 1623 1659 - -
Sto5g0167 1999 PANTHER FLAVIN MONOAMINE OXIDASE 1950 1995 - -
Sto5g0167 1999 PANTHER FLAVIN MONOAMINE OXIDASE 567 1935 - -
Sto5g0167 1999 ProSiteProfiles SWIRM domain profile. 643 743 IPR007526 GO:0005515
Sto5g0167 1999 Pfam SWIRM domain 657 733 IPR007526 GO:0005515
Sto5g0167 1999 SUPERFAMILY Homeodomain-like 643 739 IPR009057 -
Sto5g0167 1999 MobiDBLite consensus disorder prediction 81 102 - -
Sto5g0167 1999 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1474 1559 IPR035441 -
Sto5g0167 1999 SUPERFAMILY FAD/NAD(P)-binding domain 895 1380 IPR036188 -
Sto5g0167 1999 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0167 Sto-Chr5 969610 978328 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI or SNF-SWI3 Sto5g0167 Amino_oxidase 7.6e-106 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0167 5 969610 978328 Sto5g0167 5 969610 978328 ECH