Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0164 ATGCACATGCAATTACTCCACAACGACCGTGTCGTCGTCTTCGATCGCACCGACTTCGGCTTATCCAACTTGTCCCTGCCCAAAGGCAAATGCCGCAATGACCCTCAGGAGCAAGTGGTTAAAGTTGATTGCACTGCTCACTCCCTCGAGTACGACGTCGCTTCTAATACCTTTCGCCCTCTCTTTGTCCAAACTGATGTCTGGTGCTCCTCCGGCGCTGTCTTCTCCGACGGTCGTCTCGTCCAGACCGGTGGCTTCAATGACGGAGACAAAACCATCCGGATTTTCAATCCTTGCCCCACCTGTGATTGGCAAGAACTCACAGATCAGGCACTGGCGGCTCGTAGATGGTATGCCACCAATCACATTCTGCCAGATGGACGTCAGATTATCATCGGGGGCAGAAGGCAATTTAACTACGAATTTTATCCTAAATCAGGAGCCAAGAACCTTTATACTTTACCATTTCTATCACAGACTAACGATCCCGGTGCTGAGAACAATTTATACccctttgtttttttaaatgtcGACGGAAACCTCTTCATCTTCGCCAACAATCGAGCCATCTTGTTTGATTACACTACAGACAAAGTGGTGAGAACATACCCGCAAATACCGGGTGGAGATCCCAGGTGTTATCCTAGCACTGGTTCAGCAGTCTTGCTTCCTTTGAGAAATTTACAAGCGCCATCCATTGAAGCCGAGGTTGTAGTATGTGGTGGAGCCCCGAAAGGATCTTATCAGGAGGCCATCAAAGGCAATTTTGTCGAAGCTTTAAATACCTGTGCTCGAATCAAGATCACTGACCCCAACCCCAACTGGGTCATGGAGACAATGCCTGCAGGTAGAGTGATGAATGATATGATCATTCTTCCAAATGGCAACATTTTGATTATAAACGGGGCGGCTCTGGGGACGGCTGGATGGGAATCCGGGCGGGATCCGGCTCTGAACCCGGTAATTTATAAACCGGATAACAAGGTGGGGTCTCGATTCGAATTGCAAAACCCAACAAATATTCCACGGGTGTACCATTCGACAGCGATTTTGCTTCGAGATGGTCGAGTGCTCGTGGGTGGAAGCAATCCTCACATAAGGTACAATTTCAAGAAAGTGTTATTTCCGACGGAATTGAGGTTAGAGGCATATTCTCCATCGTATTTGGAGGCAGAGTTTTCCAACTTGCGTCCTAGAATTGTATCTCCAGAATCGCAGACTAAGGTGATGTATGGTCAGAAGGTGGTGGTGAGATTCCAGGTGACAGCAACGTTGGCTCAAGATTTGGTGTCGGTGACAATGTTGGCGCCACCTTTTAACACACACTCTTTCTCCATGAACCAGAGGTTGTTGGTTTTGGGGCCAACCAAAGTGtccaatttgggaaaattgacGTACGAAGTTGAGGTCACCACACCAGCTTCATCTATCCTAGCACCACCCGGTTTCTATCTATTGTTTGTGGTTCATCAAGAGATTCCCAGCGAGGGTATTTGGGTCCAAATACTATGA 1512 0.4683 MHMQLLHNDRVVVFDRTDFGLSNLSLPKGKCRNDPQEQVVKVDCTAHSLEYDVASNTFRPLFVQTDVWCSSGAVFSDGRLVQTGGFNDGDKTIRIFNPCPTCDWQELTDQALAARRWYATNHILPDGRQIIIGGRRQFNYEFYPKSGAKNLYTLPFLSQTNDPGAENNLYPFVFLNVDGNLFIFANNRAILFDYTTDKVVRTYPQIPGGDPRCYPSTGSAVLLPLRNLQAPSIEAEVVVCGGAPKGSYQEAIKGNFVEALNTCARIKITDPNPNWVMETMPAGRVMNDMIILPNGNILIINGAALGTAGWESGRDPALNPVIYKPDNKVGSRFELQNPTNIPRVYHSTAILLRDGRVLVGGSNPHIRYNFKKVLFPTELRLEAYSPSYLEAEFSNLRPRIVSPESQTKVMYGQKVVVRFQVTATLAQDLVSVTMLAPPFNTHSFSMNQRLLVLGPTKVSNLGKLTYEVEVTTPASSILAPPGFYLLFVVHQEIPSEGIWVQIL 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0164 503 CDD E_set_GO_C 393 502 IPR015202 -
Sto5g0164 503 Pfam Glyoxal oxidase N-terminus 1 242 IPR009880 -
Sto5g0164 503 Gene3D Immunoglobulins 396 503 IPR013783 -
Sto5g0164 503 SUPERFAMILY E set domains 393 502 IPR014756 -
Sto5g0164 503 SUPERFAMILY Galactose oxidase, central domain 50 390 IPR011043 -
Sto5g0164 503 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 1 502 - -
Sto5g0164 503 PANTHER SECRETED PROTEIN-RELATED 1 502 - -
Sto5g0164 503 Gene3D - 1 395 IPR037293 -
Sto5g0164 503 Pfam Galactose oxidase-like, Early set domain 397 502 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0164 Sto-Chr5 950891 952402 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g3678 9 35174717 35176108 Sto5g0164 5 950891 952402 CCT
Sto5g0164 5 950891 952402 Sto5g0164 5 950891 952402 ECH