Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0162 ATGGATCCCATAGCTGTTGCTGAAGGTCAGAAGCAGATGAAGAAGCTATACAATTTGAGTATCGACCCTGTTAATATTGGGGCTGCTATACACCAAATTAGTTCTGCATTTGGTTCCTCCTCGGGAGTAACTCTGACACCACAGAACCGATTGAATGCTTCCAATTTCAATCCCTCCTATGTGGGTGCTTCAACGCTTCTCTTACACCAAAACATGAGTCCCGAAAATCTCCAACTTGGTATACCTCCATCGCACCTCAATTTGCCTTACCCCCAACAACTACGTTCTTCGATTATGACACCGCACTCTTCTCATTCTAGGTCTTTGTCTCAACAGTCATTTTTTTCTCTGGATGGTTTGCCCCCATTGAGTCCTTCACTCTATTGTGACCCCTCGACGACCCCTCTTCTTTCTAACTCGATCTCCACAAATGTGCCCAAGGAAGAAAGTGTGGTTAACCCTTCCATTCCTGTTCCCCTCAATAGGGATCATACATTTCAGCTTGGTCATAGCGTTCTTCCTCGTAAAGGACACAGACGCTCTAGCAGTGACACTCCGTTAGGAATCTCTGGCTTTATTCCATCTTCTCCTCAGATGGTTCCCTCTGCTACTTGGATGGATCTGCACAATTCAGTTTCTAAAGGAGAAAGGTCAGGTTTTGAGAAGCCAATTCAGTTGGTGATGAAGGATGAGGCCCCTGCTGATTGCTTCAATGCAAAACCTTTGATTGAGAGAAAAGATGATGTCATGGATGATTTAGTTAGTGTGTATATGAATCTGGATAACATTGATAACCTGAATAATATATCTGCTGCGGATGATTCTTCCAAGACTTTTGAAAGTAGTGATAATGAAGTTGAGAGTCGTGTAATTGGAAAAACAAACATTGCACATGGGGAAACTTCATTCTGCttagaagaaagaagagaaggaaCCAAGAGGAGTTCTAATGGGGACATTGCACCAGGTGGCCGACATCGAAGAAGTTTCTCATTGGATAGTTCTATAGGAAACTTGAATATTGATGATGAATCACCAAAGCTTCCTCCTTTGGGGAATGGAGTTGATCAGCGGCAGCGCTCGCCTAGTAATTCAGCAGATGGTAAAACATCTGAAATCAACATGGATTTCGGAAATGGTGAATTCAATGAAGTGGAGCTAAAGAAAATAATGGAAAGTGATAAACTTACTGAGATTGCCTTGTCAGATCCCAAGCGTGCAAAAAGAATATTGGCTAATCGCCAATCAGCTGCTCGTTCAAAGGAGCGCAAGGTGCGGTACATTTCTGAACTAGAGCATAAGGTGCAAACTCTTCAGACAGAGACAACCACAATGTCTACTCAATTTACCAAATTACAGAGGGATAACTCGGAGCTTAAAACTGAGAACAATGAGTTGAAATTCAGGCTTCAAGCCGTAGAACAACAGTCCCAACTGAAAGATGCTCTGAATGAGACCTTAAGTGCTGAAGTGCAACGTCTAAGGCTCGCAGTCACAGAACTAGGTGGAGAGTCCATTCTTGCGGGTTGCATGGCTCGCCAGCGTGCTATAAACCTACAAAGGTTCCAACTTCAGCAGGAGCAGGCTAGCCAGCTTGAACAATCGCAAGCTCAAAATCATCATCCTCAGAATGAGACACAGACTCAGTCACACAAGATTCAACGCCAGCCACAGAATGACAAAGCTACTGCTTACTAA 1698 0.4317 MDPIAVAEGQKQMKKLYNLSIDPVNIGAAIHQISSAFGSSSGVTLTPQNRLNASNFNPSYVGASTLLLHQNMSPENLQLGIPPSHLNLPYPQQLRSSIMTPHSSHSRSLSQQSFFSLDGLPPLSPSLYCDPSTTPLLSNSISTNVPKEESVVNPSIPVPLNRDHTFQLGHSVLPRKGHRRSSSDTPLGISGFIPSSPQMVPSATWMDLHNSVSKGERSGFEKPIQLVMKDEAPADCFNAKPLIERKDDVMDDLVSVYMNLDNIDNLNNISAADDSSKTFESSDNEVESRVIGKTNIAHGETSFCLEERREGTKRSSNGDIAPGGRHRRSFSLDSSIGNLNIDDESPKLPPLGNGVDQRQRSPSNSADGKTSEINMDFGNGEFNEVELKKIMESDKLTEIALSDPKRAKRILANRQSAARSKERKVRYISELEHKVQTLQTETTTMSTQFTKLQRDNSELKTENNELKFRLQAVEQQSQLKDALNETLSAEVQRLRLAVTELGGESILAGCMARQRAINLQRFQLQQEQASQLEQSQAQNHHPQNETQTQSHKIQRQPQNDKATAY 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0162 565 Gene3D - 403 465 - -
Sto5g0162 565 Pfam bZIP transcription factor 405 463 IPR004827 GO:0003700|GO:0006355
Sto5g0162 565 PANTHER BZIP TRANSCRIPTION FACTOR 81 563 - -
Sto5g0162 565 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 81 563 - -
Sto5g0162 565 MobiDBLite consensus disorder prediction 302 377 - -
Sto5g0162 565 Coils Coil 449 476 - -
Sto5g0162 565 SMART brlzneu 401 465 IPR004827 GO:0003700|GO:0006355
Sto5g0162 565 MobiDBLite consensus disorder prediction 529 565 - -
Sto5g0162 565 CDD bZIP_plant_RF2 406 456 IPR044759 GO:0003700|GO:0006355
Sto5g0162 565 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 403 466 IPR004827 GO:0003700|GO:0006355
Sto5g0162 565 MobiDBLite consensus disorder prediction 174 193 - -
Sto5g0162 565 MobiDBLite consensus disorder prediction 356 372 - -
Sto5g0162 565 SUPERFAMILY Leucine zipper domain 405 457 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0162 Sto-Chr5 933905 938201 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto5g0162 bZIP_1 6.1e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0162 5 933905 938201 Sto5g0162 5 933905 938201 ECH