Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0142 ATGGGTCTCCTAAGTTTCTTAGCGGAGCAGTCAGAGTCGACAAAAGGCAGGCGAAAGCAGAAAAGagcatcttcttcatcttcatgggATCAAATCAAGAACTTGGTGAGTTGCAAGCAGATCCAAGGATCGAGAGTGCATGATccttccaaaaaccccaaaggCAATAATCCACaaggaataggaataggaatagaTTACTCGAAGCTTGGGTCGTCTTGCAGCTCCATTTGTAGCTTCAAAGACGTTGTTCACGGCAACACCCGAGTTGTTCACCGCCCCGATAACTCTTCTCCTGAAAGCAGCGGTTCACTCACCCGGAGGCCTCCCAATAACACGACGTCGTCTTCCACTTCCACCAGAAGAATgcacttcaccaaactctctGGCTGTTACCAATGTCACATGATTCTTGATCCTTCCAGACTCCCAATTCCCACAAGTACTCTCTGTTCTTGCTCCCACTGTGGAGAGCTATTCCCTAAGATGGAAAGCTTGGAGCTTCATCAAGCTACTCGTCATGCCGTTTCGGAGCTGGGGCCAGAGGATTCGGGTCGAAATATCGTGGAGATCATCTTCAAATCAAGCTGGGTGAAGAAGGGCAGAGCCATGTGCATGATCGAACGGATACTAAAAGTGCACAACACCCAGCGCACCATCCAACGCTTCGAGGAGTGCCGAGACGCAGTCAAGACCCGTGCTCACCACACCACCAAGAAGAACCCCAGGTGCGCTGCGGATGGTAACGAGCTCTTACGCTTCCACTGCACCACCATTTCCTGCGCGTTGGGTGCACGCAGATCCTCCAGCTTGTGCGCCTCCCTACCTGGCTGCACCGTCTGCACTATCATCAGGAACGGATTCCAGGGCTCCGAGGCGGGAGGGTGCAAGGGGGTGCGGACCACGGCTAGCAGCGGGAGGGCCCATGACGCCTTGCAATGCAAGGAGAGCAGAAGAGCGATGCTGGTGTGCCGTGTGATAGCGGGGAGGGTGAAGCGCGTGGCGGAGGAGGACACCGTGTCGGCTGGGTCCTACGATTCTGTAGCCGGGATTTACTCCAATCTCGAGGAACTGGTGGTGTTTAATCCAAGGGCTATCCTTCCTTGTTTCGTTGTGATTTACAAAGTGGTTTCATCATGTTGA 1143 0.4987 MGLLSFLAEQSESTKGRRKQKRASSSSSWDQIKNLVSCKQIQGSRVHDPSKNPKGNNPQGIGIGIDYSKLGSSCSSICSFKDVVHGNTRVVHRPDNSSPESSGSLTRRPPNNTTSSSTSTRRMHFTKLSGCYQCHMILDPSRLPIPTSTLCSCSHCGELFPKMESLELHQATRHAVSELGPEDSGRNIVEIIFKSSWVKKGRAMCMIERILKVHNTQRTIQRFEECRDAVKTRAHHTTKKNPRCAADGNELLRFHCTTISCALGARRSSSLCASLPGCTVCTIIRNGFQGSEAGGCKGVRTTASSGRAHDALQCKESRRAMLVCRVIAGRVKRVAEEDTVSAGSYDSVAGIYSNLEELVVFNPRAILPCFVVIYKVVSSC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0142 380 SUPERFAMILY ADP-ribosylation 176 376 - -
Sto5g0142 380 MobiDBLite consensus disorder prediction 91 121 - -
Sto5g0142 380 MobiDBLite consensus disorder prediction 1 30 - -
Sto5g0142 380 MobiDBLite consensus disorder prediction 41 60 - -
Sto5g0142 380 MobiDBLite consensus disorder prediction 41 57 - -
Sto5g0142 380 ProSiteProfiles Zinc finger C2H2 type domain profile. 151 179 IPR013087 -
Sto5g0142 380 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 21 378 - -
Sto5g0142 380 Gene3D - 167 377 - -
Sto5g0142 380 ProSitePatterns Zinc finger C2H2 type domain signature. 151 174 IPR013087 -
Sto5g0142 380 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 21 378 - -
Sto5g0142 380 MobiDBLite consensus disorder prediction 89 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0142 Sto-Chr5 816847 819498 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto5g0142 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0142 5 816847 819498 Sto5g0142 5 816847 819498 ECH