Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0130 ATGGATCGGCTGACACAAATGCTTTCATTTCTATTAACAATTGCTATATCAGCATCAGGAGTAATTTCAACGACATTCACAATAGTTAACAAATGCGACTACACCGTATGGCCAGGCATTCTTTCCAACGCCGGTGTGGCCCCTCTTCCAATCACCGGCTTCGTTCTGCAAACAGGCGAATCTCAGACCATTTCCGCACCCACCTCTTGGGGAGGTCGCTTCTGGGGTCGCACCCTCTGCACCCAAGACTCCACCGGCAAATTCTCCTGCGTCACAGGCGATTGCGGCTCTGGCAAGCTAGAATGCGCCGGCAATGGCGCCACACCACCTGCTACCTTGGCTGAATTCACTTTAGACGGAGCTGGTGGCCTTGATTTCTTCGACGTCAGCTTGGTCGACGGCTACAACGTCCCTATGCTCGTCGTCCCTCAAGGTGGCTCCGGTGACAACTGCTCCGCCACGGGTTGCGTTGTGGATCTGAACGGCGCGTGTCCTTCAGAGCTCAAGGTTGCGAGTGCGGATGGGAGGGAAGGAGTGGCTTGCAAGAGCGCTTGCGAGGCATTTGGGTCGCCTGAGTACTGTTGCAGCGGCGCGTATGGCACGCCAGATACTTGCAAGCCATCTTCCTACTCCCAGATTTTCAAGACCGCCTGCCCACGCGCCTACAGCTATGCGTATGATGACAAGACGAGTACATTTACATGTGCCTCCGCGGATTATACCATAACCTTTTGTCCTACTCCTAACACAAGTCAGAAAGCATCTCAAGAGCAAAACACGAGCACTTCTCCTACCTCACCCACTGATAACGGCACAATTGTGTACGAAGGTGCTTCTGAGCAAAGTGAATTATCAGGGGCCACGTGTGCCCACGTGTTCAAATCTGGGGTTATTGCCGCCATTGGAATGACCATTTGGCTTTTGTGCCACCTATTCTAA 939 0.5293 MDRLTQMLSFLLTIAISASGVISTTFTIVNKCDYTVWPGILSNAGVAPLPITGFVLQTGESQTISAPTSWGGRFWGRTLCTQDSTGKFSCVTGDCGSGKLECAGNGATPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMLVVPQGGSGDNCSATGCVVDLNGACPSELKVASADGREGVACKSACEAFGSPEYCCSGAYGTPDTCKPSSYSQIFKTACPRAYSYAYDDKTSTFTCASADYTITFCPTPNTSQKASQEQNTSTSPTSPTDNGTIVYEGASEQSELSGATCAHVFKSGVIAAIGMTIWLLCHLF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0130 312 SMART tha2 26 246 IPR001938 -
Sto5g0130 312 PANTHER BNAA02G17480D PROTEIN 4 271 - -
Sto5g0130 312 CDD TLP-PA 25 245 - -
Sto5g0130 312 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Sto5g0130 312 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Sto5g0130 312 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Sto5g0130 312 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Sto5g0130 312 PANTHER OS03G0233200 PROTEIN 4 271 IPR001938 -
Sto5g0130 312 MobiDBLite consensus disorder prediction 249 273 - -
Sto5g0130 312 Pfam Thaumatin family 30 246 IPR001938 -
Sto5g0130 312 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Sto5g0130 312 SUPERFAMILY Osmotin, thaumatin-like protein 24 246 IPR037176 -
Sto5g0130 312 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Sto5g0130 312 PIRSF PR5 1 285 IPR001938 -
Sto5g0130 312 Gene3D Thaumatin 24 246 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0130 Sto-Chr5 764024 765267 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0130 5 764024 765267 Sto10g0080 10 607190 610284 ECH
Sto5g0130 5 764024 765267 Sto5g0130 5 764024 765267 ECH