Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0129 ATGGATTTCTTTGTTCCTCATTATCATTTCAGCAGACGCATTACTCTCATTTCTCTTATGTTTTTGATGGGCGCATCAGGGGCTACCTTCACTCTTATTAACAAGTGTGATTACACAGTGTGGCCTGGAATTCTCGCCAATGCCGGCAGCTCCAGATTGGACACCACCGGATTTGAGCTCCAACCGGGTGGGTCTCGGAGTTTCGGAGCCCCCAATGGCTGGTCCGGAAGATTCTGGGGCAGAACCCTTTGTAGTTTCCACCCCAACACTGGACAGGGTAGTTGCGTCACAGGGGATTGCGGGTCCAACCAGGTTCAGTGCAATGGCGCGGGAGCCACCCCACCAGCGACACTAGCGGAGTTCACAATCGGGTCGGGCACGCAAGACTTCTACGACGTAAGCCTCGTGGATGGCTACAATTTGCCCATGGTGGTGGATGCCGGTGGCGGTTCGGGCTCATGTGGATCCACGGGATGCGTATCGGATCTGAATCAGAAGTGCCCGAATGAGTTACGGGTCGGGGAGCGGGCGGCTTGCAAGAGTGCGTGTGAGGCGTTTAGGAGCCCCGAGTACTGCTGTAGCGGCGCGTATGCTTCACCCGCCACTTGTAAGCCGTCGGTTTATTCCGAGATATTCAAGTCCGCGTGTCCTAAATCCTACAGCTACGCATACGACGACGCTACGAGTACATTTACGTGTAGTGGAGCGGATTATACCATCACATTCTGTCCTACAACCGCAAGGTAA 747 0.5435 MDFFVPHYHFSRRITLISLMFLMGASGATFTLINKCDYTVWPGILANAGSSRLDTTGFELQPGGSRSFGAPNGWSGRFWGRTLCSFHPNTGQGSCVTGDCGSNQVQCNGAGATPPATLAEFTIGSGTQDFYDVSLVDGYNLPMVVDAGGGSGSCGSTGCVSDLNQKCPNELRVGERAACKSACEAFRSPEYCCSGAYASPATCKPSVYSEIFKSACPKSYSYAYDDATSTFTCSGADYTITFCPTTAR 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0129 248 PIRSF PR5 6 248 IPR001938 -
Sto5g0129 248 Gene3D Thaumatin 28 244 IPR037176 -
Sto5g0129 248 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Sto5g0129 248 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Sto5g0129 248 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Sto5g0129 248 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Sto5g0129 248 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 20 246 - -
Sto5g0129 248 CDD TLP-PA 29 243 - -
Sto5g0129 248 ProSiteProfiles Thaumatin family profile. 27 244 IPR001938 -
Sto5g0129 248 SUPERFAMILY Osmotin, thaumatin-like protein 28 244 IPR037176 -
Sto5g0129 248 PANTHER OS03G0233200 PROTEIN 20 246 IPR001938 -
Sto5g0129 248 Pfam Thaumatin family 34 244 IPR001938 -
Sto5g0129 248 SMART tha2 30 244 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0129 Sto-Chr5 756751 757598 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0129 5 756751 757598 Sto11g1468 11 13923567 13924695 ECH
Sto5g0129 5 756751 757598 Sto5g0129 5 756751 757598 ECH