Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0114 ATGATTCCAGGGAATCAAAGTGTTCCAGCCCTTATTGTGTTTGGGGATTCAATAGTTGATAGTGGCACGGCAGAATTGGGAATAAAAAAGCTTGTTCCGTCGTATATGGAGCCTGCATTGCAGCCCAGTGATCTACGTACAGGAGTGAGCTTTGCTTCTGGAGGATCAGGATACGACCCTTTGACTCCCAAGATACTGAACGTGATATCACTATCTGAACAAGTGCAGCAATTCAAAGAATACATAGGAAAACTGAAAGGCAAGTTTGGAGAAGAAACAACAAACTCCATCTTATCGAAAAGTATAATTCTTGTGGTAGCAAGCAGCAATGATATCGCAGTTTCTTATTTCGACACTGGAATACGGAAGGCTCAATATGATATCTCCTCTTACACTGATGTGCTCATCCAATATGCGTCTTCTTTCATTGAGGAAATATATGGATTGGGAGGAAGAAAAATCGGTGTGTTCAGTGCACCCCCACTGGGATGCCTGCCCTCACAGCGAACAGTGTTGGGAGGAATAGAGAGAAAGTGCAAGCAAGAAGTAAACGACGCATCCAACTTGTTCAATTCTAAATTTTCTGCACACCTTCAATCCCTATCCCAAAATCTCCCTCAAGCAAACCTCGTCTTTATCGATGTTTACTCTCCATTGCTTCATATCATCAATAACCCAACTTCCTacgGGTTTGAAGTAGTGGACAAGGGATGCTGCGGCACAGGGACTATAGAAGCGTCTGTACTGTGTAACCCGCTAGACCAAACCTGTACGGACGACTCCAAAGTTCCCATGGCCATAAAGGAACCTCAAGCAGGAGCAGTAACAATTCCGGCATTGTTTGCGTTTGGAGATTCGATCCTTGATACGGGAAATAACAACAATCTTAACACGCTTACTAAGTCCAATTTTCCACCCTATGGAGTCAATTTCATTGGAGCAAAACCTACCGGAAGATTTTGCGATGGCAAGGTTCCCTCAGATTTGATAGCGGAGGCTCTAGGAATCAAAGATACATTGCCTGCATATCTGGACCCAAACCTCCGGAATGAAGACCTCAGTACTGGGGTTTGCTTCGCTTCAGGTGGCTCAGGGAATGACGAAAGAGCTAACACCATCATATCCAACgccttatttcttttttcatccGGCAACAATGACATTGCTATCACTTATAGTAGTATGACCGTGAGAAGATTACAGTACGATTTTCCCACCTATTCCAATAATTTAGTTGCCTCGGCTTCCAGTTTCTTGAAGGATGTATACGGGCTTGGAGCTCGACGAATATGGGTTTTAAGCACATTGCCTCTGGGATGCTTGCCTGGAGTTAAAGCTGTATTAGGAGGATTGAGTATCGGTCTGTGTGTAGATTTCATCAATGCAGAAGCGCAGCTATTCAATTCCAAGTTATCATCAGAGCTTGTTTCTATCAAAAGCAGCCTTGTGGACTATGACCTTCACTTCCTTGATGTCTATAACCCTCTTCTTCATCTCATTCAGAATCCTCGAAAATCAGGTTTTGAGAACGTGGGGAGAGGGTGTTGTGGTACTGGGACTGTTGAAATTGCAGCATCGTGCAATCGATTGAATCCTTTCACATGTgcaaatccttccaaatatGTTTTCTGGGATTCTGGTCATCCCACCCAGGCAGCTTACCATCACCTTGTCTCTCATCTACTTCAAACGCACAACTTCTCCACTCTAAACTAA 1716 0.4295 MIPGNQSVPALIVFGDSIVDSGTAELGIKKLVPSYMEPALQPSDLRTGVSFASGGSGYDPLTPKILNVISLSEQVQQFKEYIGKLKGKFGEETTNSILSKSIILVVASSNDIAVSYFDTGIRKAQYDISSYTDVLIQYASSFIEEIYGLGGRKIGVFSAPPLGCLPSQRTVLGGIERKCKQEVNDASNLFNSKFSAHLQSLSQNLPQANLVFIDVYSPLLHIINNPTSYGFEVVDKGCCGTGTIEASVLCNPLDQTCTDDSKVPMAIKEPQAGAVTIPALFAFGDSILDTGNNNNLNTLTKSNFPPYGVNFIGAKPTGRFCDGKVPSDLIAEALGIKDTLPAYLDPNLRNEDLSTGVCFASGGSGNDERANTIISNALFLFSSGNNDIAITYSSMTVRRLQYDFPTYSNNLVASASSFLKDVYGLGARRIWVLSTLPLGCLPGVKAVLGGLSIGLCVDFINAEAQLFNSKLSSELVSIKSSLVDYDLHFLDVYNPLLHLIQNPRKSGFENVGRGCCGTGTVEIAASCNRLNPFTCANPSKYVFWDSGHPTQAAYHHLVSHLLQTHNFSTLN 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0114 571 PANTHER GDSL ESTERASE/LIPASE EXL3 367 564 - -
Sto5g0114 571 PANTHER GDSL ESTERASE/LIPASE EXL3 25 262 - -
Sto5g0114 571 PANTHER GDSL ESTERASE/LIPASE EXL3 273 367 - -
Sto5g0114 571 SUPERFAMILY SGNH hydrolase 280 564 - -
Sto5g0114 571 CDD SGNH_plant_lipase_like 278 563 IPR035669 -
Sto5g0114 571 CDD SGNH_plant_lipase_like 9 262 IPR035669 -
Sto5g0114 571 Pfam GDSL-like Lipase/Acylhydrolase 280 560 IPR001087 GO:0016788
Sto5g0114 571 Pfam GDSL-like Lipase/Acylhydrolase 12 243 IPR001087 GO:0016788
Sto5g0114 571 Gene3D SGNH hydrolase 268 567 IPR036514 -
Sto5g0114 571 Gene3D SGNH hydrolase 2 265 IPR036514 -
Sto5g0114 571 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 273 367 - -
Sto5g0114 571 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 367 564 - -
Sto5g0114 571 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 25 262 - -
Sto5g0114 571 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 280 291 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0114 Sto-Chr5 651505 655089 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0114 5 651505 655089 Sto9g3717 9 35467477 35472539 CCT
Sto5g0114 5 651505 655089 Sto5g0114 5 651505 655089 ECH