Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0108 ATGGTTACCACAGCTGATTCTTCCTCTAACCATCACTCGCCGACTAATGCTGGGGACACCAACAGCCCTAAGTTCCCGCGAAAAAACCTTCCGTCTGCTTGGGCTCAAGTAGTCCGAGGCGGTGACACCGAATTACATTCCGGCATTCATCAATCGCTTCCATCATCGTCGCTCTCTACTTCTTTGGCCGACCAGCCACCATTCTCTGATTCCTCCCCGAAGGCGGCTTCTGCTTCGCCTCCGTTGGATAATTCTAATATTGCTGCTGGAGACAGCTCGGATGCCAATGATAGCAATGCAGGTCGTCTTAAGAGGCCTGCTTGGAACAAACCTTCTAACGGCGTTGTTGAGGCTCCTGTAATGGGTGCTGTCTCTTGGCCCGCTTTATCTGAATCCACCAAGACGCCGACTAAATCGTCAGCTAACTCGTCCTCTAAGACTGCCACGGATGGATCACTCTCAACTTCTCAGGGGCCTAGCGCTTCACCCTCCCCCCAAAAACAAGCTACTAGTAATGTGAAGCCTAATTCTGCCACAAACTATACTGTGCATCATAGACAAAGATCCATGAAGCGTGGAAGTAGCAACAGCATTGGGTCTGGTCATGCTCAGAGCAGCTTCTCCAGCCCTTCCCCTTCTCCACCTCCACCACCACCCTTTCCTGTATTTCAGATCCCCCCAAATAGCTATGGTAATGTGGTACCAGTGGTTCCAGATCCTTCTCCAAGAGAAATCCCTTACAGGAACAATAACTGGGATACAAGACCATCTGTTGGGGGTTTTGTGCCTGCAATGAATGATCATTGGAATTCCGCACGCAGAGGCAATTTTGGGACACATCAACGAGGAGATGGATCCTATCACAATAATCATGGGGGTCGGCGTGACCATGATCGTGGAAATTATGCAAATACTAGAGATTCTCATGTACAACAGAGGATACCTCCTAGGGGATTAGTGAGGCACCCACCTCCTAATACCCCTCCATTTGTTCCCCCTCAGCATATAGGACCCATTGTAAACCATGTCGGTTTTCCTGAGTTCTATTATTTCCCAACAGTACCACTGGAACCGTTCAGGGGCATGCCATTCATTACTCATGGCCCTCCTCCTGCAATGTTTATTCCTGCTGCAGGACCTCCTTTGACCAATAAGATAGTGGACcaaattgattattattttagTGATGCTAATCTAGTGAAAGATGAGTTTTTGAGATCCAACATGGATGAACAGGGTTGGGTTCCCATTACATTGATAGCAAGTTTTCGTCGAGTTAAGAATTTGACAAATAACATTCAGCTGATACTGGATTCATTACGAACTTCTAATGTTGTGGAAGTCCAGGGTGACAAGTTGCGGAGGCGTAATGAATGGACGAAGTGGCTAAACTCGTCTCAGCTTCGTGCTAATTCTGGTTCAGTATCTACTGGTGGATCAAGTTACAGCAACATAGCAGCTGATTTTCAAAAGATCACTCTGGAAGAAGCAGCAGGAACCGATAAAGGCATTTCAGACACTACTTCAGAGGCCTTTCCAGGAAGAAATCCAACAGATTCTACCGGCCAACATCAGCTCCCAAATGGCGATACTACAAGGAACACCAATTAA 1611 0.4699 MVTTADSSSNHHSPTNAGDTNSPKFPRKNLPSAWAQVVRGGDTELHSGIHQSLPSSSLSTSLADQPPFSDSSPKAASASPPLDNSNIAAGDSSDANDSNAGRLKRPAWNKPSNGVVEAPVMGAVSWPALSESTKTPTKSSANSSSKTATDGSLSTSQGPSASPSPQKQATSNVKPNSATNYTVHHRQRSMKRGSSNSIGSGHAQSSFSSPSPSPPPPPPFPVFQIPPNSYGNVVPVVPDPSPREIPYRNNNWDTRPSVGGFVPAMNDHWNSARRGNFGTHQRGDGSYHNNHGGRRDHDRGNYANTRDSHVQQRIPPRGLVRHPPPNTPPFVPPQHIGPIVNHVGFPEFYYFPTVPLEPFRGMPFITHGPPPAMFIPAAGPPLTNKIVDQIDYYFSDANLVKDEFLRSNMDEQGWVPITLIASFRRVKNLTNNIQLILDSLRTSNVVEVQGDKLRRRNEWTKWLNSSQLRANSGSVSTGGSSYSNIAADFQKITLEEAAGTDKGISDTTSEAFPGRNPTDSTGQHQLPNGDTTRNTN 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0108 536 MobiDBLite consensus disorder prediction 498 536 - -
Sto5g0108 536 MobiDBLite consensus disorder prediction 127 226 - -
Sto5g0108 536 MobiDBLite consensus disorder prediction 287 304 - -
Sto5g0108 536 MobiDBLite consensus disorder prediction 209 225 - -
Sto5g0108 536 Pfam La domain 386 441 IPR006630 -
Sto5g0108 536 SUPERFAMILY "Winged helix" DNA-binding domain 377 463 IPR036390 -
Sto5g0108 536 MobiDBLite consensus disorder prediction 272 319 - -
Sto5g0108 536 MobiDBLite consensus disorder prediction 48 99 - -
Sto5g0108 536 MobiDBLite consensus disorder prediction 128 184 - -
Sto5g0108 536 MobiDBLite consensus disorder prediction 502 536 - -
Sto5g0108 536 ProSiteProfiles La-type HTH domain profile. 376 465 IPR006630 -
Sto5g0108 536 MobiDBLite consensus disorder prediction 1 115 - -
Sto5g0108 536 PANTHER LUPUS LA PROTEIN-RELATED 9 524 IPR045180 -
Sto5g0108 536 MobiDBLite consensus disorder prediction 272 286 - -
Sto5g0108 536 CDD LAM 384 456 - -
Sto5g0108 536 MobiDBLite consensus disorder prediction 1 27 - -
Sto5g0108 536 SMART la 380 458 IPR006630 -
Sto5g0108 536 MobiDBLite consensus disorder prediction 192 208 - -
Sto5g0108 536 Gene3D - 378 466 IPR036388 -
Sto5g0108 536 PANTHER LA-RELATED PROTEIN 1B 9 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0108 Sto-Chr5 629658 634423 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0108 5 629658 634423 Sto5g0108 5 629658 634423 ECH