Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0098 ATGCTGGATTCCGTTCTTCTGGCACTCTTCCTTCCTTGCCTTGGCATGGCTTCTCTCTTTGTGGTTTATATCTGCCTTCTCTGGTACGCCACTTCTCGCCACCCTCAAACTGATACTAGCCTACCGGTGAAGCCCGTCTCCCACCAAGGCCTCTCCGCCGATGAGCTTCACAAGTTGCCAAAAGTCACCGGCAAAGAGCTGGTGATTGGGACCGAGTGCGCCGTCTGCCTCGACGAGATCCAGAACGAGCAACCGGCTCGACTGGTTCCTGGTTGCAATCACGGGTTTCATTTGGAATGCGCTGACACCTGGCTTTCCAAGCATCCCATATGCCCCGTTTGTAGAGCCAGACTTGATCCTCAGCTTTTCACCTCATCGGAAAAGGAAAACCCCTGTTGA 399 0.5388 MLDSVLLALFLPCLGMASLFVVYICLLWYATSRHPQTDTSLPVKPVSHQGLSADELHKLPKVTGKELVIGTECAVCLDEIQNEQPARLVPGCNHGFHLECADTWLSKHPICPVCRARLDPQLFTSSEKENPC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0098 132 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 121 IPR013083 -
Sto5g0098 132 ProSiteProfiles Zinc finger RING-type profile. 73 115 IPR001841 -
Sto5g0098 132 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL23 1 132 - -
Sto5g0098 132 Pfam Ring finger domain 72 115 IPR001841 -
Sto5g0098 132 SMART ring_2 73 114 IPR001841 -
Sto5g0098 132 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 132 - -
Sto5g0098 132 SUPERFAMILY RING/U-box 72 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0098 Sto-Chr5 597808 598206 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0098 5 597808 598206 Sto9g3724 9 35508520 35508909 CCT
Sto5g0098 5 597808 598206 Sto5g0098 5 597808 598206 ECH