Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2863 ATGAGCCGATCAATCGAGCCGCCGCCGCTGCTCAAATATTCATTTCGGAATTCCAAGAGGAGAGTATATTCAGGTAGCAATTCTCTGTTGATGGACCCCGACGTTGTGGAAATTTCTCCCCCAATTCATCACCCTTCGAAATTGATCAAACAGAAGGTAGTAAAGGCTATTCTGCGTGATGTGATCGACATTGATGATGACGAAGACTCTGCTGATTTAGTTTTCATTGGGGAAAACGTTGGTGGAAGCAACAAGGGGAAAGATGTCTCTGACAATATCTTTTGCCCCCCTGGTATGGAGCAATTTGGATCAGCTAATCTGCCTGAGTCCAATGGTTATGCTTCAGTATCACATAATATAAACAATGTTGAAGGTCACAATTCTGATCTATCATTTGACGAGGATGACTACATTGATCTTTTTTCGGAAGATTACATGGAAGAAGATGAGTATGCTATATTACAGGCACACTTCGATAATGTGGATATACCTGCTGGAATTGAGGCATCCATTCCTTGGATGCCCAATTTTGATCAAGATCTGAAGAAATCTGTTAGTAGTTCGTCAAATCCTTGGTCTCATACGCAGTCAAATGCTAAAAATTCTCATGTGACAAACTTACCTCAGCTTTCTTGGGCTGCAGAGCCTTCTCACCCTATCCAAGGAACTTCAGTAGGTAGTTCTAGTTTTCAGACCAAAATGGATGCTATTGATTACCCTTCTGGAATAGAGATGTCTTCTCCTCAGTTACTTACTCAACCTGTCCCAGGTAAAAAGGAAACAACTGCTTCACAAAATGGGCAGGGGACGCTGAACTTGAATCTGTCACTTGGAGTAGACTCATCCAAACCTCTGTGGTTTAAGGGACATTCCAATAGTAAGAAGCCTGCTGTTTTTCCTGGATCAAGTAGCCACCATTATTTATTAAAACCTTCAGAGTTCATGAATATTCCACCAGGAAGCGAACCTTATTGGGAAAAAATGAAGAGTGCTAAAAAGGCGCACGAAAAAGATATTTTGTTCCATTCAAGTTTCTTTAAATCTGTAGAAGGGTCATACAATGTTCCTGGAATGGAATCAGCTAACCTCACGTGGAAGAATCCTCCTAATTATAACCCATCTTTTGTTAAAGTTTCAGGTCTTAATTTTCCCTATTATCCTTTTCATGGCCCTCAAATGTTCGGTAATAATATGTGGGGTCATAATTATGCCCCTAGTGAAAAGAATGAAACTACTGCTGACATCCCCCTTGTTACAATATCTGATGAAGAAAGAGATGAAATTTTGAGGAAGTTCCGACATTTTAAACAGTTTGACACTGTTGAAGACACCTCAGACCATTACTATAATAACAATAGTAATTCCTTGAAGCAGAACCCGAAGAGTTGGTCAAAAAGAATTCAGGAAGAGTGGAAGATTCTTGAGAAGGATTTACCGGACTCGATATTTGTCCGAGTTTACGAATCAAGGATGGATCTTTTGAGGGCTGTAATTATTGGAGCTGAGGGAACCCCTTATCATGATGGCCTCTTCTTCTTTGATGTTTTCTTTCCCAGTGGCTATCCCAATGTACCACCGCAAGTCCACTACCACTCTGGTGGTCTCCGGCTCAACCCAAATTTATATCATTGTGGCAAAGTATGCCTTAGTCTACTTAATACTTGGTCTGGCAACAAGAATGAAAAGTGGCTTCCAGGTGTTTCAACAGTTCTACAGGTTCTAGTATCTATACAAGGTCTAATCTTGAATACAAAGCCTTTCTTTAATGAACCTGGATATGCTCGCATGAGTGGTTCGCCATCTGGTGAAATGAGGTCCGTGCAGTATAATGAGGAGACATTTATCCTATCATTGAGGACAATGACTTATATGATTAGAAGACCTCCAAAGGTGTGA 1896 0.4066 MSRSIEPPPLLKYSFRNSKRRVYSGSNSLLMDPDVVEISPPIHHPSKLIKQKVVKAILRDVIDIDDDEDSADLVFIGENVGGSNKGKDVSDNIFCPPGMEQFGSANLPESNGYASVSHNINNVEGHNSDLSFDEDDYIDLFSEDYMEEDEYAILQAHFDNVDIPAGIEASIPWMPNFDQDLKKSVSSSSNPWSHTQSNAKNSHVTNLPQLSWAAEPSHPIQGTSVGSSSFQTKMDAIDYPSGIEMSSPQLLTQPVPGKKETTASQNGQGTLNLNLSLGVDSSKPLWFKGHSNSKKPAVFPGSSSHHYLLKPSEFMNIPPGSEPYWEKMKSAKKAHEKDILFHSSFFKSVEGSYNVPGMESANLTWKNPPNYNPSFVKVSGLNFPYYPFHGPQMFGNNMWGHNYAPSEKNETTADIPLVTISDEERDEILRKFRHFKQFDTVEDTSDHYYNNNSNSLKQNPKSWSKRIQEEWKILEKDLPDSIFVRVYESRMDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNVPPQVHYHSGGLRLNPNLYHCGKVCLSLLNTWSGNKNEKWLPGVSTVLQVLVSIQGLILNTKPFFNEPGYARMSGSPSGEMRSVQYNEETFILSLRTMTYMIRRPPKV 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2863 631 SMART ubc_7 465 622 - -
Sto4g2863 631 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 45 630 - -
Sto4g2863 631 MobiDBLite consensus disorder prediction 243 269 - -
Sto4g2863 631 Gene3D Ubiquitin Conjugating Enzyme 421 631 IPR016135 -
Sto4g2863 631 MobiDBLite consensus disorder prediction 182 201 - -
Sto4g2863 631 Pfam Ubiquitin-conjugating enzyme 466 586 IPR000608 -
Sto4g2863 631 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 462 622 IPR000608 -
Sto4g2863 631 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 39-RELATED 45 630 - -
Sto4g2863 631 CDD UBCc 464 591 IPR000608 -
Sto4g2863 631 SUPERFAMILY UBC-like 450 629 IPR016135 -
Sto4g2863 631 MobiDBLite consensus disorder prediction 245 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2863 Sto-Chr4 29326680 29330299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2863 430 630 Miscellaneous Gene Families AT2G33770 56.158 1.01e-70 244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2863 4 29326680 29330299 Sto4g2863 4 29326680 29330299 ECH