Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2755 ATGAAGATTCAGTGCAACGTGTGTGAGGCGGCGGAGGCGGAGGTTCTGTGCTGTGCCGATGAGGCGGCGCTATGTCGGCAATGTGACGAGAAGGTTCATGCAGCCAACAAGCTAGCCACCAAGCACCAGAGGGTTCCTCTTTCTACTTCTTCCTCTCAGATGCCCAAATGTGACATCTGTCAggtatcttatatatatGAGACCGTTGGCTATTTCTTCTGTCTGGAGGATCGGGCTTTGCTCTGCAGAAAATGTGATGTGGCAATACACACAGCAAATTCCTATGTCACTACTCATCAGAGATTTCTACTCACTGGTGTAAGAGTGGGTCTTGAAGCTACTGAGCCTGTTGCTTCTCCACCCTCTACAAAGTCACAGACTGGGGGGAAAATATCAGATGCAATATCTTCTTCAGTTTCTAAGAAGGTTTCTTCAATTCCTCAGTCATCTGAATACAATGATTTGCTACCTATCCAAGTTGGAGGAGTTGAGGAGTTTCAACCAATCAAGGTATCTTATGGTGGTGGTTCTAGTGCCGGAAACATCTCAAATTGGCCCCTTGATGAATTTTTCGGGCTCAATGAATTTAGCcagaattataatttcatggATAATGGACCATCCAAGGCTGACAGTGGTAAGCTTGGGGATTCTGATTCTCCTGTCTTAAGAACAAGTGAAGAGGAAATGGAGAATGATGACTGCATAGGGTGGGTTCCGGATTCAACCTGGACGGTCCCTCAGATTCCTTCCCCTCCTACGGCGTCAGGCTTATATTGGCCGAAAGAATCTCGATTTTTGTCATCTGCTGACAATGCTCTGTTTGTTCCTGACATATGCTCTTCTCACATCCAACCGCCCCAGAAAAGTAGTACGTTACTGAAACGGCGGAGACAACTGTAA 903 0.4518 MKIQCNVCEAAEAEVLCCADEAALCRQCDEKVHAANKLATKHQRVPLSTSSSQMPKCDICQVSYIYETVGYFFCLEDRALLCRKCDVAIHTANSYVTTHQRFLLTGVRVGLEATEPVASPPSTKSQTGGKISDAISSSVSKKVSSIPQSSEYNDLLPIQVGGVEEFQPIKVSYGGGSSAGNISNWPLDEFFGLNEFSQNYNFMDNGPSKADSGKLGDSDSPVLRTSEEEMENDDCIGWVPDSTWTVPQIPSPPTASGLYWPKESRFLSSADNALFVPDICSSHIQPPQKSSTLLKRRRQL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2755 300 Pfam B-box zinc finger 53 100 IPR000315 GO:0008270
Sto4g2755 300 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 299 - -
Sto4g2755 300 Gene3D Classic Zinc Finger 1 98 - -
Sto4g2755 300 PANTHER B-BOX ZINC FINGER PROTEIN 18 1 299 - -
Sto4g2755 300 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Sto4g2755 300 CDD Bbox1_BBX-like 5 47 - -
Sto4g2755 300 SMART bboxneu5 4 47 IPR000315 GO:0008270
Sto4g2755 300 SMART bboxneu5 52 104 IPR000315 GO:0008270
Sto4g2755 300 CDD Bbox1_BBX-like 56 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2755 Sto-Chr4 28503356 28506571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2755 1 300 C2C2-CO-like Transcription Factor Family AT1G78600 46.921 4.02e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto4g2755 zf-B_box 2.3e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2755 4 28503356 28506571 Sto4g2755 4 28503356 28506571 ECH