Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2460 ATGAAGATGACCCACAAGCTGGCCTTAATTCTTGGACTAATCTCCTCCACAATGCTTCTAACAATCCTCATGCTGTTTCTCTTCTTTTACAGAAGAAGAATGAGAAActatgaagaggaagaagaagaagaaggagaagaagaagaagacatagAAGCATCAGAAAAATACAAACATGAGGAATTGGTGATTTTCCAAGGTGGTGAAGACCTCACAATATGTGATGTTCTAGAAGCTTCAGGGGAAGTGATTGGAAAATCTAACTGTGGGACACTGTACAAGGCCTCACTGCAGAGGAGCAACTCCATCAGGCTTCTCAGGTTCTTGAGACCAATTTGCTGTGCTGCTATCAGAGGGGAAGAACTGGAGGGTACGGTTCGGTTGCTTGGAGAGATTAGGCATCCCAATTTGGTGCCTCTTCTGGGATTTTACACAGGAACCAGAGGAGAGAAGCTCCTTGTTCATCCTTTCTATGCTTGTGGGAATCTGGCTCAATTCATAAGAGGTGATGGAAATGGCAAGTGTTACAACTGGTTTACCATATTCAGAATAAGCTATGGCATAGCCAAAGGATTAGAGCATCTTCACACAGCAATATTGCAGTATAAGCCCATCATCCATGGGAACCTAAAGACCAAAAACATTCTTTTGGATCGCAATTTCCAACCATATGTATCAGATTATGGGCTGCATCTTCTGCTGAATCCTACTGCTTCTCAACAAATGCTTGAAGCTTCAGCTTATGAAGGCTATAAGGCACCTGAGCTCATCAAAATGAAGGATGCTAGTGAAAAGAGTGATATCTACAGCCTTGGTGTGATACTATTGGAATTGCTTTCAGGGAAGGAACCTATCATTCATGATCATCTAACTAGTACTCCTGATGATGAGGATTTCCATTTGCCGAGTTTTATGCGAAATGCTCAAAGAATTTCTGATATGTTTCATCCTGCAATTCTTATCAGAAAAAgtagagatgatgatgatggtgatggtgaaaCTTCATTTGTTGCAGAAGAATGCATTCTCAAATGCTTTGAACTTGCTATGGCTTGTtgttctccttctccttcacttAGGCCTAACATTAAGCAAGTCCTCTGGAAGCTGGAAGAGATTGTGAGATAG 1128 0.3794 MKMTHKLALILGLISSTMLLTILMLFLFFYRRRMRNYEEEEEEEGEEEEDIEASEKYKHEELVIFQGGEDLTICDVLEASGEVIGKSNCGTLYKASLQRSNSIRLLRFLRPICCAAIRGEELEGTVRLLGEIRHPNLVPLLGFYTGTRGEKLLVHPFYACGNLAQFIRGDGNGKCYNWFTIFRISYGIAKGLEHLHTAILQYKPIIHGNLKTKNILLDRNFQPYVSDYGLHLLLNPTASQQMLEASAYEGYKAPELIKMKDASEKSDIYSLGVILLELLSGKEPIIHDHLTSTPDDEDFHLPSFMRNAQRISDMFHPAILIRKSRDDDDGDGETSFVAEECILKCFELAMACCSPSPSLRPNIKQVLWKLEEIVR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2460 375 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 374 - -
Sto4g2460 375 Coils Coil 34 57 - -
Sto4g2460 375 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 374 - -
Sto4g2460 375 SUPERFAMILY Protein kinase-like (PK-like) 81 372 IPR011009 -
Sto4g2460 375 Pfam Protein kinase domain 82 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2460 375 ProSiteProfiles Protein kinase domain profile. 78 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2460 375 Gene3D Phosphorylase Kinase; domain 1 79 157 - -
Sto4g2460 375 Gene3D Transferase(Phosphotransferase) domain 1 159 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2460 Sto-Chr4 25966703 25968451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2460 1 373 Carbohydrate Esterase AT5G61570 52.116 4.95e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto4g2460 Pkinase 3.7e-27 CL0016