Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2447 ATGGCCTCCGTCAACAACAACAGAGAGCCCATGGTTCCACCTTACCATGTTTTGATAACTGGTGCAAGCAAAGGAATAGGGTATGCATTGGCAAAAGAGTTTCTAAGAGCTGGTGACTATGTTATAATATGCTCAAGATCAGATGAAAGGGTAGAATCTGCTGTCCTGAGCCTGAGAGAAGAATTTGGGGAGCAGTATGTGTGGGGTACTAAATGTGATGTGAGAGAAGGGGAGGACGTGAAGAATTTAGTTGCATTTGCACAAGAGAAACTCAAATACATTGATATATGGATTAATAATGCAGGATCAAATGCATATAGCTACAAACCTCTTGCGGAAGCTTCAGATAAAGATCTTATTGAGGTGGTTACAACAAATACACTTGGTTTAATGATATGTTGTCGAGAGGCAATAAAGATGATGGTGAATCAGCCTCGTGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCAGATGGAAGACCAACTCCCAGATTTGCTGCTTACGGAGCCACAAAGCGAAGTGCTGTGCATTTAACAAAATCATTACAGGCAGAATTGCAGATGCAGGATGTTAAAAATGTTGTGGTGCATAATCTTTCGCCAGGGATGGTCACAACTGATCTTCTCATGTCTGGCGCTACAACTAAACAGGCAAAGTTTTTCATAAATGTGTTGGCTGAACCAGCTGAAGTGGTTGCAGAATTCCTAGTCCCAAACATTAGATCTATCCTTGCCAATGGGTCTATGAAGCCAACTTATCTTAAATTCCTCACTGGGGTGAAAGCCTATTCCCAGATATTTTCACGGTTCGCATTTGGGGCAAGAAAGAACCGGTACATGATAGAAGATTGA 855 0.4164 MASVNNNREPMVPPYHVLITGASKGIGYALAKEFLRAGDYVIICSRSDERVESAVLSLREEFGEQYVWGTKCDVREGEDVKNLVAFAQEKLKYIDIWINNAGSNAYSYKPLAEASDKDLIEVVTTNTLGLMICCREAIKMMVNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSAVHLTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEFLVPNIRSILANGSMKPTYLKFLTGVKAYSQIFSRFAFGARKNRYMIED 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2447 284 PRINTS Glucose/ribitol dehydrogenase family signature 16 33 IPR002347 -
Sto4g2447 284 PRINTS Glucose/ribitol dehydrogenase family signature 92 103 IPR002347 -
Sto4g2447 284 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Sto4g2447 284 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Sto4g2447 284 PRINTS Glucose/ribitol dehydrogenase family signature 193 210 IPR002347 -
Sto4g2447 284 CDD SDR_c 17 238 - -
Sto4g2447 284 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 234 IPR036291 -
Sto4g2447 284 Gene3D - 15 244 - -
Sto4g2447 284 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 3 284 - -
Sto4g2447 284 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 156 184 IPR020904 GO:0016491
Sto4g2447 284 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 IPR002347 -
Sto4g2447 284 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Sto4g2447 284 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Sto4g2447 284 Pfam short chain dehydrogenase 16 212 IPR002347 -
Sto4g2447 284 PANTHER CHLOROPHYLL(IDE) B REDUCTASE NOL, CHLOROPLASTIC 3 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2447 Sto-Chr4 25858397 25864625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2447 17 209 Acyl Lipid Metabolism Gene Families AT1G24360 30.303 1.33e-15 73.9