Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2444 atgatgatgatagcgATGGTGATAATAGCCAAACCATTTTCCCATTCACTTCACCTCCTCCTCGTCttactcttcttctttctcgccATCCATCACTCATATCAGTCTCAGCAATCTCAGTCTCAGACTCAGACCCTTTTGATATTCCAGAAGCTTCTAGGCTACCCATCAGCTCTAAGCAGCTTCACCAGCACAACAGACTTCTGCAACATCGAGCCCACCACCTGTTTGACAATAGTCTGCTATGAGGGAAATATCTCGCAGCTTCATGTTGTTGGCAACAATGGGGTTTCCCCTTTGCCTCTGGATTTCTCTTCAGATTCTCTATTTGCCACTCTAGCTAGTCTTCCCAGCTTGAAGGTCCTCTCTATGGTTTCTATGGGTCTCTGGGGTCCCATACCTGAAAGCATTTCTCAACTCACTTCTTTGGAAATTCTTAACATTAGCTCAAATCACTTCAGTGGAGCTGTTCCAACCCAAGTTTCTCTTCTGAGGGGTCTTCAATCTTTGGTTCTTGATGATAACTATTTCACAGGTGAAATCCCCACATGGGTTGGCTCGCTTCAAGGTTTGGCTGTGTTGAGTATGAGGAAAAATTTACTGACTGGGTCTGTGCCAAATTCTGTTAGTGCTCTTCAAACTTTGAGGGTATTGGATCTTTCAGATAATCAGTTATCTGGAGATTTACCTGAACTTAGAAATTTGAAAAATCTTCAAGTTCTTCATTTGGAAAATAACACATTTGGACCCCATTTTCCTTCTCTTCCCACCAAGTTAGTTTCTCTTGTGCTTAGAAATAACAGCTTCCGCTTTGGTGTACCTTCTAATTTAAGCTCCTTCTATCAGCTTCAGAAGCTGGACCTTTCATTAAATGGGTTTGTGGGACCATTTGTTCCCTCCTTACTCTCTTTGCCTTCCATCAAGTACCTTGATGTTTCAGAAAATAAATTCACTGGGATGCTATTCAGTAATTCTTCTTGCAATTCTGATATCCTTTTTGTGAATCTATCTTCAAATCTCTTAAAAGGGGAGCTTCCCAGTTGTTTGAAACCAAAGAATAGTGTGATTGTGGTGTATGCTAGAAACTGTTTTTCAAATGCAGATCAAGATCAGCACACTCCAAACTTTTGCCAAAATGAGGCTCTGGCAGTGAATATCAGATCCCATGAACAAAAGCATAAAAGAATAACTGGTAAAGCAGTTCTTGTGTCAAGCATGGGAGGGATTTTTGGAGGAGCCCTTATTTTTGGAGTGGTTTTCTTGGTCATTATCCGAGTCAACAGAAAAGGGGCTGTGAAAGCACCTTCAGGGGCCGCATTGGAGCAAGCTATAAGCCAAATGAATGACAAACAAGAAGTGAAAACACCTACAAAGTCCGTAATGGAGAATATCTTCAACCGAGTGTCTATTATGCCTTACAAGGATTCTGTGAAAACACTTGCAAGATCCATGATGGAGCATGTCATTAATCAGGTTCATAACAAGCATGTGAAAACACATACAAGGTCCATAGTAGAGCATGCCTCATCTGTAAACACAGCAAAACTACTTACAGATGCAAGGTATATCTCACAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAAGACCTTCGCTTTGGAGGAACTTAAGGAGGCTACTAACAACTTTGATGCATCATGTTTCATAAGTGAAGGTTCACGTGGTCAGATGTACAAAGGGGTGCTCTCTGACGGAACTCAGATTGCCGTTAGAAGtttgaaaatgaagaaaagacATGGTCCTCAGACCTATATGCACCATATTGAATTGATTTCGAAACTCAGGCATTCACACTTGGTCAGTGCCCTTGGACATTGCTTTGAGTGTAATCAGGATGATCCAAATGTCAGCAGTATATATGTCATATTCGAGTTTGCACCATACAGAAGTTTAAGGGGCTGCATATCTGGATCTTCAGGAGAAAAGCTTTCTTGGGCACAGAGACTAGCAGCTGCAATTGGAGTAGTTAAGGGCATTCAATTTTTGCACACTGGGATAGTGCCTGGAATGTATTCAAATAATTTGAAGATAACAGATATTCTACTAGACAGCAATCTTAATGTTAAAATAAGCAGCTATAATCTTCCTCTATTGGCTGAAAATAAGATCATGGTAGGCAATGGAACTTTTTCTCCTGGAGTAAAAGGAAATGTTCAAGCAAGGATGAACGATGGGGACAAGAATGATGTCTACGATTTTGGGGTAATCTTGCTAGAAATCGCTCTAGGACGAACGATCATGTTCCATAATGAAGTTGGAACACTAAAAGATCTTTTACAGGTAAGCTTAGCAACTGATGATATAGCTAGAAGGAGCATAGTTGATCCAGCAGTTCATAAGGAGTGCTCAGATGAATCATTGCAGACAGTAATGGAGATATGTGTGAGGTGTCTCTCAGAAGATCCTACTGATAGGCCTTCTGTGGAAGATATCCTCTGGAATTTGCAGTTTGCATCACAGGTTCAGAATTCATGGAGAAGAGACTCCAACGATATTCGAGAGTCTCCCGCTTCGTCGTCCCACGAGATATAA 2556 0.4041 MMMIAMVIIAKPFSHSLHLLLVLLFFFLAIHHSYQSQQSQSQTQTLLIFQKLLGYPSALSSFTSTTDFCNIEPTTCLTIVCYEGNISQLHVVGNNGVSPLPLDFSSDSLFATLASLPSLKVLSMVSMGLWGPIPESISQLTSLEILNISSNHFSGAVPTQVSLLRGLQSLVLDDNYFTGEIPTWVGSLQGLAVLSMRKNLLTGSVPNSVSALQTLRVLDLSDNQLSGDLPELRNLKNLQVLHLENNTFGPHFPSLPTKLVSLVLRNNSFRFGVPSNLSSFYQLQKLDLSLNGFVGPFVPSLLSLPSIKYLDVSENKFTGMLFSNSSCNSDILFVNLSSNLLKGELPSCLKPKNSVIVVYARNCFSNADQDQHTPNFCQNEALAVNIRSHEQKHKRITGKAVLVSSMGGIFGGALIFGVVFLVIIRVNRKGAVKAPSGAALEQAISQMNDKQEVKTPTKSVMENIFNRVSIMPYKDSVKTLARSMMEHVINQVHNKHVKTHTRSIVEHASSVNTAKLLTDARYISQTMKMGASLPAYKTFALEELKEATNNFDASCFISEGSRGQMYKGVLSDGTQIAVRSLKMKKRHGPQTYMHHIELISKLRHSHLVSALGHCFECNQDDPNVSSIYVIFEFAPYRSLRGCISGSSGEKLSWAQRLAAAIGVVKGIQFLHTGIVPGMYSNNLKITDILLDSNLNVKISSYNLPLLAENKIMVGNGTFSPGVKGNVQARMNDGDKNDVYDFGVILLEIALGRTIMFHNEVGTLKDLLQVSLATDDIARRSIVDPAVHKECSDESLQTVMEICVRCLSEDPTDRPSVEDILWNLQFASQVQNSWRRDSNDIRESPASSSHEI 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2444 851 Gene3D Phosphorylase Kinase; domain 1 511 621 - -
Sto4g2444 851 Gene3D Transferase(Phosphotransferase) domain 1 636 846 - -
Sto4g2444 851 Pfam Protein tyrosine and serine/threonine kinase 557 821 IPR001245 GO:0004672|GO:0006468
Sto4g2444 851 SUPERFAMILY L domain-like 67 367 - -
Sto4g2444 851 Gene3D Ribonuclease Inhibitor 253 378 IPR032675 -
Sto4g2444 851 ProSiteProfiles Protein kinase domain profile. 551 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2444 851 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 501 842 - -
Sto4g2444 851 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 449 - -
Sto4g2444 851 Gene3D Ribonuclease Inhibitor 161 252 IPR032675 -
Sto4g2444 851 Gene3D Ribonuclease Inhibitor 41 160 IPR032675 -
Sto4g2444 851 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 18 449 - -
Sto4g2444 851 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 501 842 - -
Sto4g2444 851 SUPERFAMILY Protein kinase-like (PK-like) 531 826 IPR011009 -
Sto4g2444 851 ProSiteProfiles Leucine-rich repeat profile. 214 236 IPR001611 GO:0005515
Sto4g2444 851 Pfam Leucine rich repeat 165 225 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2444 Sto-Chr4 25838626 25843772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2444 497 848 Miscellaneous Gene Families AT3G03770 59.218 1.23e-136 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Sto4g2444 PK_Tyr_Ser-Thr 2.8e-18 CL0016