Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2425 ATGTCACTTAATTCTTCACTCatcccatccttcttcttcctcctcttcttcttcttcctcttctcacCATTATTACCATCACTCCTAGCtcaacctcctcctcctcctactTCAGCCTCAGCATGCAAATCCACACTCTACCCAAAACTATGTCGTTCCATCCTCTCAGCCATTGGCTCCTCCCCCTCCGACCCCTACAACCTAGGCAAATTCTCCATCAAGCAGAGCCTCAAACAAGCCAAGAAACTCGCCAAGGTCTTTGACGACTTCCTCACAAAGCACAAATCATCGTCATCATCCTCGTCACTCGAGATGGCGGCGCTTTCCGACTGCAGCGAGCTGAACGGGCTGAACGTGGGGCTGCTGGAGACGGTGTGGTCGCAGCTGAAGGCGGCGGAGGCGTCGAGCCCGGAGCTGGTGGAGGGGATCGAGACGTACCTGAGCGCGGTGGCCACGAACCACTACACGTGCTACGACGGGCTCGTGGCGACCAAGAGCGGGATTGGGAATGCATTGGCTGTGCCGCTAAAGGATGTGACGCAACTCTATAGTGTGTCGCTTGGGTTGGTGAGTCAGGCTTTGTACCGAAACCAAAAGAAGCTTAAGGTTAAGAAAAAAGGTCTTCCTACACAATCTTTCAAGGTCAGACAGCCACTTCAGAAGCTCATTAAGCTTCTGAGGGGGAAGTATGGATGCAATAAGGATTCTTCCTCATCATCGGATTGCAGTAGTAGTAATTCTAGAAACGAAAGGATTCTTCTGAAAGAAAGTGAGAACAGAGGGATTCTACTGAATGAGTTTGCGATAGTGAGTCCTTATGGAACAAGAAACTTCAGTAGCATTGGAGAAGCCATTGATGCTGCACCTAACAACACATTGCCACAAGATGGCTATTTCCTCATTTACGTGAAAGAAGCAGTGTATGAAGAATACGTAGTTATTCCAAACTATAAGAAGAATATTTTGCTCATTGGAGATGGTATTGATCGCACCATTATTACGGGGAATCATAGTGTGGGAGATGGCTGGACTACTTTCAATTCTTCCACCtttgCGGTATCCGGCGACAGATTCATAGCCGTGGACATCACATTCCGCAACACCGCCGGCCCCAGCAAGCACCAAGCCGTGGCGGTCCGAAACAACGCCGACCTCTCGACTTTCTACCGCTGCAGCTTCGAAGGCTACCAAGACACCCTCTACGTCCACTCCCTCCGCCAATTCTACCGCGACTGCCGCATCTACGGCACCGTCGACTTTGTCTTCGGCAACGCCGCCGTGGTCATCCAAAACTCCCTCCTCCTCGCCCGCCAGCCCCTCCCCTTCCAGAAGAACGCCGTCACCGCCCAGGGCCGCACCGACCCCAACCAAAACACCGGCATCTCCATCCAGAACTGCACCCTGGCCGCCGCCCCGGACCTCGCCGCCGCGGCGGCCGGCGGCGGCGCCAACGGGACCTACACCTTCCTTGGGCGGCCGTGGAAGGAGTACTCGAGGACGGTGGTGATGGAGTCTTACATCGGGGATGTGGTGCAGCCTtctggttggttggagtggaaCGGTACTATCGGACTAGATACGTTGTTTTACGGCGAGTTTAAGAATTACGGCCCCGGCGCCGATACCAGTAGGAGGGTAAATTGGGGAGGATATAATTTGTTGAGTGCTGAACAAGCTTTGAATTTTACTGTCATGAGGTTTACTTTGGGAGAGACTTGGCTTCCTGATACGGATATTCCTTACTTTGCTGGGTTAGATGgttga 1764 0.4994 MSLNSSLIPSFFFLLFFFFLFSPLLPSLLAQPPPPPTSASACKSTLYPKLCRSILSAIGSSPSDPYNLGKFSIKQSLKQAKKLAKVFDDFLTKHKSSSSSSSLEMAALSDCSELNGLNVGLLETVWSQLKAAEASSPELVEGIETYLSAVATNHYTCYDGLVATKSGIGNALAVPLKDVTQLYSVSLGLVSQALYRNQKKLKVKKKGLPTQSFKVRQPLQKLIKLLRGKYGCNKDSSSSSDCSSSNSRNERILLKESENRGILLNEFAIVSPYGTRNFSSIGEAIDAAPNNTLPQDGYFLIYVKEAVYEEYVVIPNYKKNILLIGDGIDRTIITGNHSVGDGWTTFNSSTFAVSGDRFIAVDITFRNTAGPSKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRDCRIYGTVDFVFGNAAVVIQNSLLLARQPLPFQKNAVTAQGRTDPNQNTGISIQNCTLAAAPDLAAAAAGGGANGTYTFLGRPWKEYSRTVVMESYIGDVVQPSGWLEWNGTIGLDTLFYGEFKNYGPGADTSRRVNWGGYNLLSAEQALNFTVMRFTLGETWLPDTDIPYFAGLDG 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2425 587 Pfam Plant invertase/pectin methylesterase inhibitor 40 188 IPR006501 GO:0004857
Sto4g2425 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 193 IPR035513 -
Sto4g2425 587 PANTHER PECTINESTERASE 13 585 - -
Sto4g2425 587 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Sto4g2425 587 Gene3D - 264 585 IPR012334 -
Sto4g2425 587 PANTHER PECTINESTERASE 13 585 - -
Sto4g2425 587 Pfam Pectinesterase 268 570 IPR000070 GO:0030599|GO:0042545
Sto4g2425 587 SUPERFAMILY Pectin lyase-like 267 584 IPR011050 -
Sto4g2425 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 192 IPR035513 -
Sto4g2425 587 SMART PMEI_2 33 189 IPR006501 GO:0004857
Sto4g2425 587 CDD PMEI-like_3 40 191 - -
Sto4g2425 587 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 191 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2425 Sto-Chr4 25641344 25645081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2425 41 585 Carbohydrate Esterase AT3G10720 59.598 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2425 4 25641344 25645081 Sto4g2425 4 25641344 25645081 ECH