Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2417 ATGGAGGAAAGTAATAATATGTCAAAGTCAccacaagaagaaggagaagaagaagaagaagaagaagaaggggtgAGGGTTGTGGTGATCCAACATGTATCATCAAGAAATGTTAATACAAAGGCAATCAAATGGGCCCTTCAAGCCTTCTCACTTGGGCCCAATGATGAGCTTACTCTTCTCCCAATTCTTCGCCATCTTCATCACACCTCTTCCTTCTTCACACCTTTTTCCAAACCTCAACAGAGAAGTGTTGAGGAAGAAATAGCCAAGAGGAAGCAAGAGTACCTAAACAATGAAGACATCATAAAAATATGTGAGCAGTGTCAAATAGATAAGATTCAATTCCAAATACAAATGCTTCCCAGCCCTAATCCAGAGGCTGCTGTGAATGCTGCCAACAATTTGAGGGCAACATTGGTGATACTTGATAGAGAcatgaaaaaatataagaagTGTTTCATGAAGAACCTCTCTTGTGGTATCATATTAATGAAACCTAATAACTCCATTGAACACCTAAAAGGACCAACACAAACAAGACTATCTCAAAGAGGCAATTCAATTCCTATCAACTGTTCTAGATCCTCATTACTCAAGCACCTCACAGGAAATCCAGTTTTGTGCCCTTATAGGATTAACCCTACCAAGGCTAAGAAAACCCAATTTCAATCTCAAACCATTCAAAGACCTTCAAATAGAGAACTAGACATGGCAAGAGGGTATTGTTTATTACCCTTTACAGGTTCTCAGGAGACAAACCATACAACATTTGAACAACAAAAGAAGAAACATCATATCAACAACAACCATGAAGAAGATAAGGATTCTGTTTGCTCTCAGTGCAAGAACACAAGGCCAAGATTTGGACACCAAAGAGACTTCACATACTCAGAGATCCATGCAGCCACAAAGGGATTTTGCCCCACAAACTTTCTCTCAGAAGGTGGGTTTGGTTCTGTGTACAGAGGGGAGATTCATGGGATGAAGATTGCAGTGAAGCAACACAGATGTGAGACAAGCAGCCTCCAAGGAGAGAAGGAGTTCAAGTCTGAGGTTGATGTTCTTGGCAAAGCAAGACATGAGAATGTGGTGATGTTACTAGGATCATGCTCTGAAGGACACAAGAGGATTCTTGTTTATGAATATGTCTGCAATGGTTCACTTGACCAACATTTATCACAATATTCCCGGAAACCCATTAGTTGGCCGGACAGGATCAAAGTAGCTTTTGGAGCTGCCAAAGGTTTACTGTACTTGCATCAGAACAATATCATTCACAGAGATATGAGACCAAATAACATCCTTGTCACACATGATTATGAAGCATTGCTGGGAGATTTTGGTCTGGCAAGACTTAGTGTTGGAGAATCATTATACTCAACAGATGTGGTGGGAACTCTGGGGTATATGGCCCCAGAATATGCAGAATCTGGGAAAGCATCAACCAAAACAGATGTGTATTCCTTTGGAGTCATTCTTCTTCAACTAATAACTGGAATGAAGACCACTGATAAAAGACTTGGAGATAAAAGTCTTGTGGGATGGGTGGTAGATGTGTTTAGTCAATTAGTGGAAGGCAGCACATGCAGTGTTGTACTAAGAGATTGCTCTCCTTCAAGATTAGATTCATCCTATGACACGTCAGACTTTCCTGAATCAcaaggtgatgatgatgatgatgatggaagctTCTATGGAGGATCTACTCCAATTGGTAGTAGCATGAGCATGAGCCATATGAGTTTAAGACTCCCCCCATCTCCTCCAATGGGGACAACTTACTCAAGTGCTCTTTcatccaaaaaggatttattggCACAAACAGCAGGGAACTCATTCAAGATTGATGTTGCACCGAACGGAGAAACAGGGTCAATGTATTCTTCCCATTCTGTCCCGTACGCATTCAATGTGGAACTGTCAGCTCTATCACCAGGAGTTGCAGCAGATGAATTTGAACTCTGA 1968 0.3892 MEESNNMSKSPQEEGEEEEEEEEGVRVVVIQHVSSRNVNTKAIKWALQAFSLGPNDELTLLPILRHLHHTSSFFTPFSKPQQRSVEEEIAKRKQEYLNNEDIIKICEQCQIDKIQFQIQMLPSPNPEAAVNAANNLRATLVILDRDMKKYKKCFMKNLSCGIILMKPNNSIEHLKGPTQTRLSQRGNSIPINCSRSSLLKHLTGNPVLCPYRINPTKAKKTQFQSQTIQRPSNRELDMARGYCLLPFTGSQETNHTTFEQQKKKHHINNNHEEDKDSVCSQCKNTRPRFGHQRDFTYSEIHAATKGFCPTNFLSEGGFGSVYRGEIHGMKIAVKQHRCETSSLQGEKEFKSEVDVLGKARHENVVMLLGSCSEGHKRILVYEYVCNGSLDQHLSQYSRKPISWPDRIKVAFGAAKGLLYLHQNNIIHRDMRPNNILVTHDYEALLGDFGLARLSVGESLYSTDVVGTLGYMAPEYAESGKASTKTDVYSFGVILLQLITGMKTTDKRLGDKSLVGWVVDVFSQLVEGSTCSVVLRDCSPSRLDSSYDTSDFPESQGDDDDDDGSFYGGSTPIGSSMSMSHMSLRLPPSPPMGTTYSSALSSKKDLLAQTAGNSFKIDVAPNGETGSMYSSHSVPYAFNVELSALSPGVAADEFEL 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2417 655 SUPERFAMILY Protein kinase-like (PK-like) 287 527 IPR011009 -
Sto4g2417 655 ProSitePatterns Tyrosine protein kinases specific active-site signature. 425 437 IPR008266 GO:0004672|GO:0006468
Sto4g2417 655 Gene3D Phosphorylase Kinase; domain 1 278 383 - -
Sto4g2417 655 MobiDBLite consensus disorder prediction 1 25 - -
Sto4g2417 655 Gene3D Transferase(Phosphotransferase) domain 1 384 552 - -
Sto4g2417 655 PANTHER OS01G0253100 PROTEIN 30 517 IPR045271 GO:0004714|GO:0006468
Sto4g2417 655 PANTHER OS01G0253100 PROTEIN 517 549 IPR045271 GO:0004714|GO:0006468
Sto4g2417 655 Pfam Protein tyrosine and serine/threonine kinase 313 508 IPR001245 GO:0004672|GO:0006468
Sto4g2417 655 MobiDBLite consensus disorder prediction 568 582 - -
Sto4g2417 655 Gene3D HUPs 12 163 IPR014729 -
Sto4g2417 655 ProSiteProfiles Protein kinase domain profile. 307 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g2417 655 PANTHER TYROSINE KINASE FAMILY PROTEIN 517 549 - -
Sto4g2417 655 PANTHER TYROSINE KINASE FAMILY PROTEIN 30 517 - -
Sto4g2417 655 MobiDBLite consensus disorder prediction 541 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2417 Sto-Chr4 25579812 25590173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2417 295 526 Trihelix Transcription Factor Family AT5G38560 48.133 2.54e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Sto4g2417 PK_Tyr_Ser-Thr 2.4e-45 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2339 7 28926648 28936453 Sto4g2417 4 25579812 25590173 CCT