Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2389 ATGGGTGCTGTAGAAAGTCCAGTAGATGAAAAAGCAGATTATCTTCCTGAAGAagcaacaaatattttaaaatcgtTGGCTAGTGAGTGGGAAGATGTACTTGATGCAAACGCATTGCAGGTGATACCTCTTAAAGGGGCAATGACGAATGAGGTATTCCAGATAAAATGGCCAACAACACAGGAAACCTCACGAAAAGTTATAGTAAGAATTTATGGTGAGGGTGTGGAAGTTTTCTTTGACAGGGATGATGAGATCCGGACATTTGAATTCATGTCTCAGCATGGGCAGGGCCCTCGCCTGCTAGGACGGTTTGCTAATGGTCGTATTGAAGAGTTTATCAATGCACGGACATTATCAGCATCTGATCTGCAAGATCCAAATATCTCTGCTCTTATAGCAGTCAAATTGAAGGAATTCCATGATCTTGACATGCCTTGTCCAAAGCAAGTCCACTTGTGGGATAGATTACGGAACTGGCTTAGTGAGGCTAGGTCTTTGTGTTGTCCTAAAGAGGCTGAAGCCTTTTATTTGGACACAATTGAAAAGGAAATTTCCATGCTGGAAAAGGAGCTATCAGGTCCTCACCAACGCATAGGATTTTGCCACAACGATTTACAATATGGCAACATAATGCTGGATGAAGAGACCAATTCTCTGACCATAATTGATTATGAATATGCAAGTTATAATCCTATAGCATATGACATAGCAAACCACTTCTGTGAGATGGCTGCTGACTATCATACAGAAACACCTCATATTCTTGATTTCAGTAAATATCCTGATTTGGAGCAGCGGCAACTTTTTGTATATGCATATTTGAGTTCTTCAGGTGAAGAGCCTAGTGACAGTGAAGTGGAGTATCTAGTTCACGAAGTCGAGAAGTTTACACTTCCAAATCATTTATTCTGGGGCATATGGGGAATAATTTCGGGATATGTAAACAAAATCGACTTTGACTACAAGGAGTATGCAAAACAGAGGTTTCAAGAGTACTGGTCAAGGAAACCTTTTGTTTTGGGCTCTGTTGGACCTTCCCCTGAAAGTGTGATTGACGATACCAGTACGTAA 1074 0.4032 MGAVESPVDEKADYLPEEATNILKSLASEWEDVLDANALQVIPLKGAMTNEVFQIKWPTTQETSRKVIVRIYGEGVEVFFDRDDEIRTFEFMSQHGQGPRLLGRFANGRIEEFINARTLSASDLQDPNISALIAVKLKEFHDLDMPCPKQVHLWDRLRNWLSEARSLCCPKEAEAFYLDTIEKEISMLEKELSGPHQRIGFCHNDLQYGNIMLDEETNSLTIIDYEYASYNPIAYDIANHFCEMAADYHTETPHILDFSKYPDLEQRQLFVYAYLSSSGEEPSDSEVEYLVHEVEKFTLPNHLFWGIWGIISGYVNKIDFDYKEYAKQRFQEYWSRKPFVLGSVGPSPESVIDDTST 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2389 357 Gene3D Phosphorylase Kinase; domain 1 26 113 - -
Sto4g2389 357 PANTHER CHOLINE/ETHANOALAMINE KINASE 2 351 - -
Sto4g2389 357 Pfam Choline kinase N terminus 12 38 IPR007521 GO:0016773
Sto4g2389 357 Gene3D - 73 334 - -
Sto4g2389 357 CDD ETNK_euk 39 336 - -
Sto4g2389 357 SUPERFAMILY Protein kinase-like (PK-like) 13 339 IPR011009 -
Sto4g2389 357 Pfam Choline/ethanolamine kinase 64 266 - -
Sto4g2389 357 PANTHER CHOLINE KINASE 2-RELATED 2 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2389 Sto-Chr4 25355751 25358968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g2389 1 343 Acyl Lipid Metabolism Gene Families AT1G74320 66.279 2.71e-177 494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2313 7 28693900 28697272 Sto4g2389 4 25355751 25358968 CCT
Sto4g2389 4 25355751 25358968 Sto4g2389 4 25355751 25358968 ECH