Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sto4g2328 | ATGGTTTTTGCTCAAAGTCCGAGCCAATTCATCCACAGTGTGTGCGCAATCGTGGTCAAGGGTCATTGGAGCAATCTATTGAAGGCGAACAAGGGTTCTGTtctcacttcttcttcttctaccatTCACCAGGTACTTCTTCAACTCTCACTCCATGGCTATGCCCCTTCTCATTCCTTGGCCTTCTTCAAATGGGCCGAGTCTATTCCCAATTATAGGCACTCTTTGCAATGTTCATGGTCCATGCTTCATATCCTCGTTAAGCATAAGCATTTTAAGATTGCACAAGAGATGCTTGAGAAAATTGCGCACAGGGATTTTCTGTCATCGCCGTCAGTTTTGACGAGTCTGGTGGAAATTCACGATGACCCGGAAGTGAATTCCCAAATATTGAGCTGGCTTGTAATCATTTATACACAGTGGAAGATGAACGATGATGCCATTCAGGTTTTTGAGCAGATGAGATTGTATAAATTGAACCCTCATTTGCATGCCTGTACTGTGCTTTTGAATTCCTTGGTCAAGGATAGGGTTACTAATATGGTGTGGAAGATTTACAAGAAGATGgttaaaattggggtttttccTAATATTCATATCTATAATGTGTTAATCCATGCTTGTTCCAAATCAGGAGATGTGGAGAGGGCAGAGCAGTTACTAAATGAGATGGAAGTGAAGGGTGTGTTTCCTGATATTTTCACTTACAATACTTTGATAGCATTATACTGCAAGAAAAGTATGCACTATGAGGCTTTGTCTATCCAGGATAAAATGGAAAGAGAAGGAATACATCTTGATATTGTTAGTTATAATTCTCTTATTCATGGATTTTGTAGAGAGGGTAGGATGAGAGAAGCCATGAGGATATTTAGTGAAATCAAAGGTGCTATTCCCAATCATGTTACTTTTACTACGTTGATTGATGGATATTGTAAAACAAATGACCTTGAGCAAGCTCTGAAATTGCGAGATATGATGGAGGCTAAGGGATTGTACCCTGGAGTTGTTACTTACAATTCAATTTTACGCAAACTGTGTCAGGACGGCAGAATAAGAGATGCAAATAAACTCTTGACTGAGATGAGTGAAAGAAAAGTTCAAGCTGACAATGTCACATGTAACACATTGATCAATGCCTACTGCAAGATAGGAGATATGAAATCTGCATTGAAATTTAAGAACAAGATGTTAGAGGCTGGATTGAAGCCTGACCCATTTACATATAAAGCATTAATTCATGGGTTCTGCAAGACAAAGGAACTGGAAAGTGCCAAGGAGATATTGTTTAGCATGCTTGATGCTGGGGTCTCGCCCAATTACTACGCTTATTCTTGGATCGTAGATGGTTACTGCAATAAAGACAATGAAGAGGCAGTTGTTACACTCCCAGATGAGTTTCTTAGAAGAGGCCTTTGTGTTGATGTTTCAGTATATAGGGCATTAATAAGAAGGTTATGTAAGTTGGAAAGAATAGCATGTGCTGAGAAGTTATTCAATCTTATGGAAGGCAATGGAATATCAGGCGATAGTGTTGTCTACACTAGTCTTGCTTATGCTTACTGGAAATCAGGGAATGCAAGAGTTGCCTCAAATATGTTAGAAGAGATGGCTAGGAGGAGGTTGATGATAACAAGCAAAATCTATAGATGTTTTGGTGATCCTGTTAATAGTGAAAGAAACCACACATCTTCTTTATTTTGGAATCATGTGTTGGATAGGGGCCTGATGTCAAGAAATACTATGAATAAAATACAGCAGATGGAATTGTGA | 1773 | 0.3813 | MVFAQSPSQFIHSVCAIVVKGHWSNLLKANKGSVLTSSSSTIHQVLLQLSLHGYAPSHSLAFFKWAESIPNYRHSLQCSWSMLHILVKHKHFKIAQEMLEKIAHRDFLSSPSVLTSLVEIHDDPEVNSQILSWLVIIYTQWKMNDDAIQVFEQMRLYKLNPHLHACTVLLNSLVKDRVTNMVWKIYKKMVKIGVFPNIHIYNVLIHACSKSGDVERAEQLLNEMEVKGVFPDIFTYNTLIALYCKKSMHYEALSIQDKMEREGIHLDIVSYNSLIHGFCREGRMREAMRIFSEIKGAIPNHVTFTTLIDGYCKTNDLEQALKLRDMMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLTEMSERKVQADNVTCNTLINAYCKIGDMKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTKELESAKEILFSMLDAGVSPNYYAYSWIVDGYCNKDNEEAVVTLPDEFLRRGLCVDVSVYRALIRRLCKLERIACAEKLFNLMEGNGISGDSVVYTSLAYAYWKSGNARVASNMLEEMARRRLMITSKIYRCFGDPVNSERNHTSSLFWNHVLDRGLMSRNTMNKIQQMEL | 590 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 475 | 509 | IPR002885 | - | |
| Sto4g2328 | 590 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN | 6 | 586 | - | - | |
| Sto4g2328 | 590 | PANTHER | ATPASE EXPRESSION PROTEIN 3 | 6 | 586 | - | - | |
| Sto4g2328 | 590 | Gene3D | Tetratricopeptide repeat domain | 251 | 363 | IPR011990 | GO:0005515 | |
| Sto4g2328 | 590 | Gene3D | Tetratricopeptide repeat domain | 434 | 582 | IPR011990 | GO:0005515 | |
| Sto4g2328 | 590 | Gene3D | Tetratricopeptide repeat domain | 55 | 250 | IPR011990 | GO:0005515 | |
| Sto4g2328 | 590 | Pfam | Pentacotripeptide-repeat region of PRORP | 146 | 284 | IPR033443 | - | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 197 | 231 | IPR002885 | - | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 405 | 439 | IPR002885 | - | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 300 | 334 | IPR002885 | - | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 510 | 544 | IPR002885 | - | |
| Sto4g2328 | 590 | Pfam | PPR repeat | 512 | 541 | IPR002885 | - | |
| Sto4g2328 | 590 | Gene3D | Tetratricopeptide repeat domain | 364 | 433 | IPR011990 | GO:0005515 | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 370 | 404 | IPR002885 | - | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 232 | 266 | IPR002885 | - | |
| Sto4g2328 | 590 | Pfam | PPR repeat | 470 | 503 | IPR002885 | - | |
| Sto4g2328 | 590 | Pfam | PPR repeat | 295 | 328 | IPR002885 | - | |
| Sto4g2328 | 590 | Pfam | PPR repeat | 330 | 363 | IPR002885 | - | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 267 | 297 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 337 | 370 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 269 | 295 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 372 | 405 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 302 | 335 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 200 | 233 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 478 | 510 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 234 | 267 | IPR002885 | - | |
| Sto4g2328 | 590 | TIGRFAM | PPR: pentatricopeptide repeat domain | 407 | 440 | IPR002885 | - | |
| Sto4g2328 | 590 | Pfam | PPR repeat family | 370 | 418 | IPR002885 | - | |
| Sto4g2328 | 590 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 335 | 369 | IPR002885 | - |