Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2319 ATGGAGTCCCTAGTTCTTAACCTCCATGAGATCTCAGCTGTTAAATTTGGTAACTTCAAGCTCAAATCTGGCATTTCTTCACCTATCTACTTAGACCTCCGACTCGTTATATCATACCCTTCCCTCCTCCGCAAAATCTCTCAAACGCTGATTTCCTCtgtctcttcctcttcctttgaCCTTGTATGTGGTGTCCCTTACACTGCTCTACCCATTGCTACTTGTGTCTCTGTCACTCATAACATTCCCATGGTCATGCGCCGGAAAGAGATCAAAGACTATGGCACTTCTAAAGCCATTGAAGGTGATTTCAAGGCTGGCCAAAGTTGCTTAATTGTTGAGGACCTAGTTACTAGTGGCACTTCGGTATTAGAAACTGCTGCACCCCTGCGTGCAGCAGGTTTGAAAGTCAGTGACGCTGTCGTGTTGATTGATAGAGAGCAAGGTGGGAGAGAGAATTTGGAGGAGAATGGGATCAGGCTGCATTCAATTGTTAAATTGACTGAAATGGTGAAAATCTTGAGGGAAAAAGGAAAGCTTGAGAAGGAGATGGTAGAGGTTGTTATGAAATTCTTAGAGGAGAATCAGAGGGTTGCTGCTTTGGCGACTGCAAAGAAGGCCGCTAGGATCAAGGCTTTGTCATTTAGAGAGAGGGCAAAGTTGTCCAAGAATCCAACTGGAAAGAGGTTGTTTGAGATAATGGATGAGAAGGAGAGTAATCTTTGTTTGGCTGCAGATGTTGAAACTGCAGCTGAATTGCTTGAAATTGCTGAGAAGGTTGGGCCTGAGATATGCTTGCTGAAAACTCATGTGGATATTTTGCCAGATTTTACTCCTGATTTCGGTTCTAAACTTCGCTCGATTGCAGAAAAgcataactttttaatctttgagGATCGTAAATTCGCTGACATTGGTAACACAGTGACTATGCAGTATGAAGGTGGGATTTATCATATACTGGAATGGGCTGATATAGTAAATGCTCACATTGTTTCCGGTCCTGGCATTGTGGATGGATTGAAATTGAAGGGTTTGCCTCGTGGTAGGGGTCTGTTGCTGCTTGCTGAAATGAGTTCAGCCGTCAATCCGGCATCATGGCCTGGGGCACCTGTAAATCCTTCTTTCATTCACGCAACTCCTGGAGTTCAAATGGTGACTGGTGGTGATGCTTTAGGGCAGCAATATAGTACTCCACATTCTGTTGTCTATAATAGGGGTAGTGACATAATAATTGTTGGCCGCGGCATCATCAAGGCCGAAAATCCAGCCGAGGCGGCTCATGAATACCGACTTGAAGGATGGAAAGCTTATATGGCCAAGTGCACGTGA 1332 0.4332 MESLVLNLHEISAVKFGNFKLKSGISSPIYLDLRLVISYPSLLRKISQTLISSVSSSSFDLVCGVPYTALPIATCVSVTHNIPMVMRRKEIKDYGTSKAIEGDFKAGQSCLIVEDLVTSGTSVLETAAPLRAAGLKVSDAVVLIDREQGGRENLEENGIRLHSIVKLTEMVKILREKGKLEKEMVEVVMKFLEENQRVAALATAKKAARIKALSFRERAKLSKNPTGKRLFEIMDEKESNLCLAADVETAAELLEIAEKVGPEICLLKTHVDILPDFTPDFGSKLRSIAEKHNFLIFEDRKFADIGNTVTMQYEGGIYHILEWADIVNAHIVSGPGIVDGLKLKGLPRGRGLLLLAEMSSAVNPASWPGAPVNPSFIHATPGVQMVTGGDALGQQYSTPHSVVYNRGSDIIIVGRGIIKAENPAEAAHEYRLEGWKAYMAKCT 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2319 443 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 361 443 - -
Sto4g2319 443 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 1 363 - -
Sto4g2319 443 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 361 443 - -
Sto4g2319 443 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 1 363 - -
Sto4g2319 443 SUPERFAMILY Ribulose-phoshate binding barrel 213 439 IPR011060 -
Sto4g2319 443 Gene3D - 1 209 IPR029057 -
Sto4g2319 443 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 296 309 IPR018089 GO:0004590|GO:0006207
Sto4g2319 443 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 241 361 IPR014732 GO:0004590|GO:0044205
Sto4g2319 443 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 373 430 IPR001754 GO:0004590|GO:0006207
Sto4g2319 443 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 239 361 IPR001754 GO:0004590|GO:0006207
Sto4g2319 443 CDD PRTases_typeI 59 166 IPR000836 -
Sto4g2319 443 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 224 IPR023031 GO:0004588|GO:0006221
Sto4g2319 443 Pfam Phosphoribosyl transferase domain 46 152 IPR000836 -
Sto4g2319 443 SMART OMPdecase_2 240 430 IPR001754 GO:0004590|GO:0006207
Sto4g2319 443 CDD OMP_decarboxylase_like 241 430 - -
Sto4g2319 443 TIGRFAM pyrE: orotate phosphoribosyltransferase 8 169 IPR004467 GO:0004588
Sto4g2319 443 Gene3D Aldolase class I 210 365 IPR013785 -
Sto4g2319 443 SUPERFAMILY PRTase-like 4 192 IPR029057 -
Sto4g2319 443 Gene3D Aldolase class I 366 443 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2319 Sto-Chr4 24627096 24630199 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2319 4 24627096 24630199 Sto4g2319 4 24627096 24630199 ECH