Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2190 ATGGCGGAGAAGGGCGAATTAGTAGGAGGAAGAGAAGGGATAGTGAAGGTGGAACCTAAACCTAGTAAAGGGTTTACTTCCAAAGCCATCGATCTTTTAGAGAAGCTGGTTGTGAAGTTCATGTATGATTCCTCAAAGCCTCTTCACTGGCTCTCTGGTAATTTCGCTCCCGTACCTGATGAAACCCCTCCCACGAAGGACCTTCCCGTCAAAGGCCATCTTCCGGATTGCTTAAATGGAGAGTTTGTCAGGGTGGGACCGAATTCCAAGTTTCCTCCTGTAGCTGGATATCATtgGTTTGATGGAGATGGAATGATTCATGGTTTGCGCATCAAAGACGGAAAAGCTACATATGTTTCCCGTTTTGTGAAAACATCTCGTCTTAAACAAGAAGAATTCTTTGGAGGTGCAAAATTTATGAGGATTGGAGATCTTAAAGGTCTGTTTGGACTTGTGATGGTTAACATTCAAATGCTAAGAGCAAAAATGAAAGTATTGGATGTTTCTTATGGAACTGGAACGGCCAATACAGCTCTTGTATATCACCACGGGAAGCTTCTAGCACTCTCTGAAGCAGATAAACCTTATGCTATTAAAGTTTTTGAAGACGGGGATTTACAAACACTTGGCTTGCTGGACTATGACAAGAGATTGAGCCATTCCTTTACTGCTCATCCAAAAGTTGATCCATTTACTGGTGAGATGTTTACATTTGGCTATTCACATGCACCACCATATATAACGTACAGAGTAATTTCAAAGGATGGGTATATGCATGATCCTGTTCCTATAACAATATCAGAGCCCATCATGATGCACGACTTCGCCATCACAGAGAACTATGCAATATTTCTGGATCTTCCTTTACATTTTAGGCCAAAGGAAATGGTGAAGGACAAAAAACTGATATACTCATTTGATTCAACCAAAAAAGCTCGTTTTGGTGTACTGCCTCGATATGCTAAGAATGAGCTGCAAATTAGATGGTTTGAGCTTCCCAACTGCTTCATATTCCACAATGCCAATGCTTGGGAGGAGGAGGATGAAGTTGTTTTGATTACCTGCCGCCTGGAAAATCCCGATTTGGAGATGGTCGGTGGGACTGTCAAAGAAAAgcttgataattttaaaaatgaactGTATGAAATGAGATTTAACATGAAAACGGGTCTAGCTTCACAGAAGAAACTCTCCGCATCTGCTGTAGATTTTCCTAGGGTAAACGAAAGCTACACGGGCAGttatactTTTCAAAGTTCTATGTTCCatcctcatttcttttcttatgtgCTTATGACTTATGAGAAGCAGCGATTTGTATATGGAACCATATTAGACAGCATTGCAAAAGTCTCGGGAATTATCAAATTTGATTTGCATGCTGAACCAGATTCTGGGAAGACAAAACTTGAAGTTGGAGGAAATGTTCAGGGTATCTTCGACTTGGGACCAGGGAGATTTGGTTCTGAGGCTGTTTATGTCCCTCGTGTGCCTGGCATCAATTCCGAAGAAGATGATggatacttgattttctttgtgCATGACGAGAATACCGGAAAATCAGCCGTGAATGTGATTGATGCAAAGACGATGTCAGCTGATCCTGTTGCGGTTGTTGAATTGCCACATAGGGTTCCATATGGTTTCCATGCCTTCTTTGTGACTGAGGAACAATTGCAAGAACAGGCGAATCTGTAG 1698 0.4028 MAEKGELVGGREGIVKVEPKPSKGFTSKAIDLLEKLVVKFMYDSSKPLHWLSGNFAPVPDETPPTKDLPVKGHLPDCLNGEFVRVGPNSKFPPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVKTSRLKQEEFFGGAKFMRIGDLKGLFGLVMVNIQMLRAKMKVLDVSYGTGTANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGLLDYDKRLSHSFTAHPKVDPFTGEMFTFGYSHAPPYITYRVISKDGYMHDPVPITISEPIMMHDFAITENYAIFLDLPLHFRPKEMVKDKKLIYSFDSTKKARFGVLPRYAKNELQIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPDLEMVGGTVKEKLDNFKNELYEMRFNMKTGLASQKKLSASAVDFPRVNESYTGSYTFQSSMFHPHFFSYVLMTYEKQRFVYGTILDSIAKVSGIIKFDLHAEPDSGKTKLEVGGNVQGIFDLGPGRFGSEAVYVPRVPGINSEEDDGYLIFFVHDENTGKSAVNVIDAKTMSADPVAVVELPHRVPYGFHAFFVTEEQLQEQANL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2190 565 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 9 561 - -
Sto4g2190 565 Pfam Retinal pigment epithelial membrane protein 55 554 IPR004294 GO:0016702
Sto4g2190 565 PANTHER BETA-CAROTENE DIOXYGENASE 9 561 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2190 Sto-Chr4 23350998 23358497 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2190 4 23350998 23358497 Sto4g2190 4 23350998 23358497 ECH