Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2184 ATGTGCGGTGGTCCAGATAAATCAAAATCTTCTTCAACTCAATCTTCATCTACTGTAGAAAGTGCAACTAACATCAACGACATGAAAAAGCTAACTGTTCACACAGAAGATTCTTTCTCCAGCTTGCTGGAACTTGCTTCTAACAATGATGTTGAAGGCTTTAAGCTATTGTTAGATAGGGATTCTTCTTCAATAAGTGAAGTTGGGCTCTGGTATTGTCGCCAAATTGGATCGAGACAAATTATTCTTGAGGATAGAACTCCATTAATGGTTGCTGCTACCTATGGTAGTATTGATGTTCTGAAGCTTATACTTTCTTATCCCGATGCTGATGTCAACTTCTCATGTGGGGCGAGTAAGAGCACTGCCCTGCATTGTGCTGCTTCTGGTGGTTCTATTAATGCAGTTGATGTAGTAAAGCTTCTTTTAGCGGCTGGTGCTAATCTCAATTGCATGGATGCTAGTGGAAATCGTCCTGTTGATGTTATTATTGTTCCTCCTAAGCTGCAAGGCATGAAAGCAATTCTGGAGGAGCTTCTTTCTGATATTGCATCTGACGACTCTGTTGGTGACTGCTCTATCCCAGTGCCTGGTAATTCATCAAGTCCTGGTTTGCCTGCTCATTTATTATCTCGCTCACCATCTTCTCCAGTGGCTACGAAGTTTGCTGATGCACCTGTTAGTTCTACCTCGGAGAAGAAAGAGTATCCAATTGATCCATCACTTCCTGATATTAAAAACAGCATATATGCTACAGATGAATTTCGTATGTTCTCATTTAAGGTTCGTCCTTGTTCCCGTGCCTACTCTCATGATTGGACTGAGTGTCCTTTTGTTCATCCTGGAGAGAATGCTCGAAGGAGAGACCCCAGAAAATTCCATTACAGCTGTGTGCCATGCCCTGATTTTCAGAAGGGGGCTTGTAGGCGAGGGGATATGTGTGAATATGCACATGGAGTATTTGAATGCTGGCTACATCCAGCTCAGTATCGTACTAGGCTCTGCAAAGATGGCACAAGTTGCAATAGACGTGTGTGTTTTTTTGCTCACACTGCAGAAGAGATGCGCCCACTGTATGTGTCCACTGGTTCTGCTGTCCCTTCTCCGCGGGCATCTGCCTCAGCCCCCAATGTCATGGATATGGCTGCTGCAATGAACCTGTTGCCTGGTTCTCTTTCATCAGTGTCTTCCATGTCTCCATCTCACTTTGCCCAGCCAATGTCTCCATCAGCTAATGGCATCTCGCACTCAACTGCAGCTTGGCCTCAGCCCAATGTGCCAGCCCTTCATCTACCTGGAAGTAACCTTCAATCTAGTCGCCTGAGATCTTCTTTTAGTGCGCGTGACATTCCACCTCACGACTTGAACATGATGCCAGATTTTGATGGTCAGCAACACCTCTTGAATGATCTGGGCTGTTTCTCACAGCCCCGTCCTGGCACTGTTACTGTGAACCGATCTGGTCGGTCCAAGACACTAACCCCATCAAATCTTGAAGAATTGTTTTCTAATGAAATTTCTTCATCTCCCCGGTATTCTGACCCAGCAGCAGCTTCTGTTTTTTCTCCTACTCATAAGTCTGCTGTGCTCAATCAGTTTCAACAGCTTCAAAGTATGCTGTCACCAATAAATACTAATGTTATGTCTCCTAAAAATGTTGAGCATCCTTTGTTACAGACTCCGTTTGGTGTATCTTCCCCTGGAAGGATGTCACCAAGAAGTGTCGAACCAATATCTCCTATGAGCTCCCGTTTATCTGCATTTGCTCAGCGTGAGAAACAGCAGCAACAGCAACAGCTGCGGAGCCTTAGTTCAAGGGAACTCGGTTCGAAAAACCCTGCTTCAGTTGGTTCCCCTGTAAACTCTTGGTCTAACTGGGGATCCCCTACTGGAAAAGTTGATTGGTCGATAAATGGAGACGAATTAGGTCGATTGCGCAAGTTTTCTTCATCTGAGCTTGGGAACAATGGGGAAGAACCCGATCTGTCTTGGGTCCAATCCCTTGTGAAGGAATCCCCACCTGAGATGATGAGAGAGAAGTTGGCATCCTCCGGCCCCATCGCATCATCTGCAGATAAACTAAATTCGATTTCTCAAATTGAATCCATTGATAATTCTGTTGTAGGAGCTTGGCTGGAGCAAATGCAGCTTGATCAGCTCGCAGTTTAG 2169 0.4514 MCGGPDKSKSSSTQSSSTVESATNINDMKKLTVHTEDSFSSLLELASNNDVEGFKLLLDRDSSSISEVGLWYCRQIGSRQIILEDRTPLMVAATYGSIDVLKLILSYPDADVNFSCGASKSTALHCAASGGSINAVDVVKLLLAAGANLNCMDASGNRPVDVIIVPPKLQGMKAILEELLSDIASDDSVGDCSIPVPGNSSSPGLPAHLLSRSPSSPVATKFADAPVSSTSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFQKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTAEEMRPLYVSTGSAVPSPRASASAPNVMDMAAAMNLLPGSLSSVSSMSPSHFAQPMSPSANGISHSTAAWPQPNVPALHLPGSNLQSSRLRSSFSARDIPPHDLNMMPDFDGQQHLLNDLGCFSQPRPGTVTVNRSGRSKTLTPSNLEELFSNEISSSPRYSDPAAASVFSPTHKSAVLNQFQQLQSMLSPINTNVMSPKNVEHPLLQTPFGVSSPGRMSPRSVEPISPMSSRLSAFAQREKQQQQQQLRSLSSRELGSKNPASVGSPVNSWSNWGSPTGKVDWSINGDELGRLRKFSSSELGNNGEEPDLSWVQSLVKESPPEMMREKLASSGPIASSADKLNSISQIESIDNSVVGAWLEQMQLDQLAV 722
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2184 722 ProSiteProfiles Ankyrin repeat profile. 119 154 IPR002110 GO:0005515
Sto4g2184 722 PANTHER UNKEMPT FAMILY MEMBER 22 720 IPR045234 -
Sto4g2184 722 SUPERFAMILY Ankyrin repeat 35 164 IPR036770 -
Sto4g2184 722 MobiDBLite consensus disorder prediction 558 625 - -
Sto4g2184 722 Gene3D - 294 357 - -
Sto4g2184 722 ProSiteProfiles Ankyrin repeat region circular profile. 119 153 - -
Sto4g2184 722 MobiDBLite consensus disorder prediction 195 224 - -
Sto4g2184 722 SMART c3hfinal6 329 352 IPR000571 GO:0046872
Sto4g2184 722 SMART c3hfinal6 294 320 IPR000571 GO:0046872
Sto4g2184 722 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 56 22 720 - -
Sto4g2184 722 PRINTS Ankyrin repeat signature 85 100 IPR002110 GO:0005515
Sto4g2184 722 PRINTS Ankyrin repeat signature 138 152 IPR002110 GO:0005515
Sto4g2184 722 ProSiteProfiles Zinc finger C3H1-type profile. 299 321 IPR000571 GO:0046872
Sto4g2184 722 Pfam CCCH-type zinc finger 299 319 IPR041367 -
Sto4g2184 722 Coils Coil 586 606 - -
Sto4g2184 722 Gene3D - 11 214 IPR036770 -
Sto4g2184 722 SMART ANK_2a 119 151 IPR002110 GO:0005515
Sto4g2184 722 SMART ANK_2a 84 114 IPR002110 GO:0005515
Sto4g2184 722 SMART ANK_2a 37 67 IPR002110 GO:0005515
Sto4g2184 722 Pfam Ankyrin repeats (3 copies) 46 153 IPR002110 GO:0005515
Sto4g2184 722 MobiDBLite consensus disorder prediction 1 22 - -
Sto4g2184 722 MobiDBLite consensus disorder prediction 576 625 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto4g2184 Sto-Chr4 23280495 23282693 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Sto4g2184 Ank_2 1.8e-10 CL0465
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2184 4 23280495 23282693 Sto4g2184 4 23280495 23282693 ECH