Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g2133 ATGGCTCACTGGCAGAGCGATTTAGATCAGGGGATTGACTACATGTTCAAGATCGTCTTGATCGGAGACTCCGGCGTCGGCAAGTCTCAGCTCCTGGCTCGTTTCGCCAGGAATGAGTTCAATTCCAAGTCCAAAGCCACCATCGGAGTTGAATTCCAGACCAAGACTGTGCTCATGGATCACAAAGTCGTTAGGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTACCAGGCTGTTACAACTGCGTATTACAGAGGTGCAATTGGCGCCTTGCTAGTATATGACATAACCAAGCATGATACTTTTGATCATGTTGAAAGATGGCTGGAAGAACTACGGATGCATTCAGATAAGAATATTCTTGTCATGCTTGTTGGCAACAAGTGTGACCTGGGTTCTCTTCGAGCTGTACCTGTCGAGGAAGCCAAAGAACTTGCACAGAGGCAGGGTCTCTTCTTCATGGAGACATCAGCACTTGACTCCACCAATGTGGAGCCAGCTTTCCTTGGTCTTCTCTCTCAGATATATGTCAGTATCCGTAAGGAACCCCTTGTTTCTAACGGACTAGAATTAAAACTAGAGAGAGTAAATCTTGAAGGGACAGAAATTGATGTCTCTTCAGAGGAGCAAAATTGCCTTTGGTGCGATAATTTTGAGTTTGCTATGAGGTTCTCCATTAGAGTTATGACATGTGAAAGAACCCTTTTTAAGCCAACTTGTGATGTTCCCAGTACAGCTTTGCTTCTCAAGGTACAAATTTTCTCAGTTGGGTTATATGACTTGTAA 789 0.4449 MAHWQSDLDQGIDYMFKIVLIGDSGVGKSQLLARFARNEFNSKSKATIGVEFQTKTVLMDHKVVRAQIWDTAGQERYQAVTTAYYRGAIGALLVYDITKHDTFDHVERWLEELRMHSDKNILVMLVGNKCDLGSLRAVPVEEAKELAQRQGLFFMETSALDSTNVEPAFLGLLSQIYVSIRKEPLVSNGLELKLERVNLEGTEIDVSSEEQNCLWCDNFEFAMRFSIRVMTCERTLFKPTCDVPSTALLLKVQIFSVGLYDL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g2133 262 PANTHER - 1 211 - -
Sto4g2133 262 PRINTS Transforming protein P21 ras signature 16 37 - -
Sto4g2133 262 PRINTS Transforming protein P21 ras signature 39 55 - -
Sto4g2133 262 PRINTS Transforming protein P21 ras signature 57 79 - -
Sto4g2133 262 PRINTS Transforming protein P21 ras signature 119 132 - -
Sto4g2133 262 PRINTS Transforming protein P21 ras signature 154 176 - -
Sto4g2133 262 ProSiteProfiles small GTPase Ras family profile. 10 230 IPR001806 GO:0003924|GO:0005525
Sto4g2133 262 ProSiteProfiles small GTPase Rho family profile. 9 187 - -
Sto4g2133 262 ProSiteProfiles small GTPase Rab1 family profile. 11 216 - -
Sto4g2133 262 SMART rho_sub_3 18 175 IPR001806 GO:0003924|GO:0005525
Sto4g2133 262 CDD Rab11_like 13 177 - -
Sto4g2133 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 186 IPR027417 -
Sto4g2133 262 TIGRFAM small_GTP: small GTP-binding protein domain 14 169 IPR005225 GO:0005525
Sto4g2133 262 SMART ran_sub_2 21 221 - -
Sto4g2133 262 PANTHER RAB GTPASE-LIKE PROTEIN G3A 1 211 - -
Sto4g2133 262 SMART rab_sub_5 16 179 - -
Sto4g2133 262 Pfam Ras family 17 176 IPR001806 GO:0003924|GO:0005525
Sto4g2133 262 SMART ras_sub_4 16 179 - -
Sto4g2133 262 Gene3D - 9 213 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g2133 Sto-Chr4 22794374 22796732 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g2133 4 22794374 22796732 Sto4g2133 4 22794374 22796732 ECH