Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g1829 ATGACTTCCTCTGACTGCACGTGCAACGACGTCGTCACGAGTCTCACCGAAGTCGCCAATCCGAGTGGCGACAACAACAACAGCACCATTAACTTAGCTCTCAGATTCAAAGTCGTCTCTATCGCTTCCGTCCTCGTCGCCGGTGCCCTTGGCGTGAGCCTCCCATTACTGAGCAAACAGATCCCAACTCTGAATCCCCAAAACGACGTCTTCTTCATGGTCAAAGCTTTCGCGGCCGGCGTGATTCTAGCCACCGGCTTCATTCACATACTCCCGGAAGCGTTCGAGGCCCTGACGTCTCCTTGCTTGAAGGACAATCCTTGGGGGAGATTCCCCTTCTCGGGATTCATCGCTATGGTGTCGTCCATAGCGACCCTAATGGTAGATTCTATCGCGACGGGGTATTATAAGAAGCAGCACTTTAAGAATTCTAAACAGGTGTTGGAGTTGGGAATAGTGGTGCATTCAGTGATCATTGGGATATCTTTGGGTGTGGCTCAAAGTATTGACACCATCAAGCCTCTCTTGGTTGCACTTtcttttcatcagttttttgaGGGCATGGGTCTTGGTGGTTGCATATCTCAGGCAAAATTCAAGTCAAGGTCCACAGCAATAATGGCTAGctttttctctctcacaacACCAATAGGGATAGCAATAGGAATGGGAATTTCAGGAGTGTACAAAGAGAACAGCCAAACAGGCCTTATTGTGGAAGGCATTTTCAATTCTGCTTCAGCTGGAATCTTGATTTACATGGCATTAGTTGATCTCCTAGCTGCAGATTTTATGAACCCTAGATTGCAGAGCAATTTCAAGATCCATTTTGGAGCAAACATTTCTCTCCTTTTAGGGGCAGGAAGAACAAGATCAGCTTCGACGGAGCACAAAGAAGTCCAAGGTATCTTCCAATCGTCGGCCGATCTTTCTTCGGCTAGGCCAATGGATGAAAGCCCCGTCACGAGGGACAAGAACGCTGATACGAGGATGAGTGAAGCAGGGGAATCAGATGTAAATAAGAGGGATTCAGAGCCCAAGGTAGTCAGAAGCCTACAATGGAGCAAAGAAACCCTAGATGTTCCGTCTTTCAGAGATAAACTTCTAGGGATTAATGTTAATGAGGAAGAGCAACCCCAAAAGGAGCCCATGGAAAATTGCACTGCTTCTCAATCAACCGTTAGTGAGAAATACTCTGCCCCCCAAGTGGAAAATCCTGTCTACTCGCAAGGTGACCCGAGAAGAGTTCGGAAGGCTAACTTCAAAAAGAGTGACAACCCTCTTGCGGTAACAAAAAAGATGTCCACCTCGGTCAAACTCAATCCAGGTATGAGAAAATCAGGTAAGTCTCCTTATGAAAAAGCAAATGATCACACAGTTGTCACATCTAGCTCGGAATTGGAATATCTAGGAGAGGCTTCAGCTTCAATGCGTCAGAATAATTTTATGCTCTCTCAGAAATTCTCAGATGCAGAGAAACCAATGCTGCGCAAACGTAGAAGTTCGATCCACAAGCATTCAAAGAAATTGAGAGCGATTAGGCATTTTGATTTCGATCTTGATCAATCTTTAGAATCTTCAAATGCACAACCCTATAGTGTTagctcaccattttctctgccTCCGTATGAGTCTCTTGCTCCGATTCCATTGCCAGAAAATAGCCCTCCTTTCTGTGTATTTCCTCCGAACCCTCCTTCTACAAGTACTCCTCCCATAGTTTTTTCTCCACCTTCACCTCCTTACTATTACCCCTCACCCACTATTCCAGCCCAAGGCCCACCACCAGGCCCGCCTGAAATTGTTCCAAGCCCACCCGAATCTCTTCCTTCACCAGCTCCTGGAGTTGTTCCAAGCCCACCAAGTAACGTTCCAGGCTCACCTGTACCGATAATAAACCCACCTGTTACCTATCCAGGCCCACCTGGGTCAATGATGAGCCCACCATATTATGAGCCCAGCCCACCATATTACGAGCCCAGTCCACCATATGAGATTCCATCTCCTAGTGGTGGAGGTATTGTCCCCAACCCACCAGGTTCATTTCCATCACCCACAGGAGGTGGTAGTGTCCCTAGCCCAACAGTGTTTCAGCCACCGGTTGTCTATCCGCCACCGAGTGTGCCACCGCCGCCTAATGTTGCCCCGAGCTCAACCTTATGGTGTGTGGCTAAGCCCACTGTGCCAGACCCAATTATGTTGGAGGCCATGAACTATGCTTGTTGGTCTGGGGCTGATTGTGACTCGATTCAGCCCAATGGGCCATGCTTTCAGCCCAATTCTGTCTATGCACATGCCTCGTATGCTTTCAATAGTTATTGGCAGAAGACCAAGGGTAATGGTGGCACATGCGAGTTTGGAGGGACAGCCATGCTAGTTGCAGTTGATCCCAGTGAGTACTACAAATAA 2409 0.4682 MTSSDCTCNDVVTSLTEVANPSGDNNNSTINLALRFKVVSIASVLVAGALGVSLPLLSKQIPTLNPQNDVFFMVKAFAAGVILATGFIHILPEAFEALTSPCLKDNPWGRFPFSGFIAMVSSIATLMVDSIATGYYKKQHFKNSKQVLELGIVVHSVIIGISLGVAQSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFKSRSTAIMASFFSLTTPIGIAIGMGISGVYKENSQTGLIVEGIFNSASAGILIYMALVDLLAADFMNPRLQSNFKIHFGANISLLLGAGRTRSASTEHKEVQGIFQSSADLSSARPMDESPVTRDKNADTRMSEAGESDVNKRDSEPKVVRSLQWSKETLDVPSFRDKLLGINVNEEEQPQKEPMENCTASQSTVSEKYSAPQVENPVYSQGDPRRVRKANFKKSDNPLAVTKKMSTSVKLNPGMRKSGKSPYEKANDHTVVTSSSELEYLGEASASMRQNNFMLSQKFSDAEKPMLRKRRSSIHKHSKKLRAIRHFDFDLDQSLESSNAQPYSVSSPFSLPPYESLAPIPLPENSPPFCVFPPNPPSTSTPPIVFSPPSPPYYYPSPTIPAQGPPPGPPEIVPSPPESLPSPAPGVVPSPPSNVPGSPVPIINPPVTYPGPPGSMMSPPYYEPSPPYYEPSPPYEIPSPSGGGIVPNPPGSFPSPTGGGSVPSPTVFQPPVVYPPPSVPPPPNVAPSSTLWCVAKPTVPDPIMLEAMNYACWSGADCDSIQPNGPCFQPNSVYAHASYAFNSYWQKTKGNGGTCEFGGTAMLVAVDPSEYYK 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g1829 802 PRINTS Proline rich extensin signature 534 550 - -
Sto4g1829 802 PRINTS Proline rich extensin signature 554 566 - -
Sto4g1829 802 PRINTS Proline rich extensin signature 578 599 - -
Sto4g1829 802 PRINTS Proline rich extensin signature 599 615 - -
Sto4g1829 802 PRINTS Proline rich extensin signature 617 634 - -
Sto4g1829 802 PRINTS Proline rich extensin signature 644 669 - -
Sto4g1829 802 MobiDBLite consensus disorder prediction 297 313 - -
Sto4g1829 802 TIGRFAM zip: ZIP zinc/iron transport family 146 289 IPR004698 GO:0005385|GO:0016021|GO:0071577
Sto4g1829 802 PANTHER ZINC/IRON TRANSPORTER 146 288 - -
Sto4g1829 802 PANTHER ZINC/IRON TRANSPORTER 23 147 - -
Sto4g1829 802 Pfam ZIP Zinc transporter 143 288 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Sto4g1829 802 MobiDBLite consensus disorder prediction 318 349 - -
Sto4g1829 802 MobiDBLite consensus disorder prediction 661 685 - -
Sto4g1829 802 MobiDBLite consensus disorder prediction 383 406 - -
Sto4g1829 802 Gene3D - 715 801 - -
Sto4g1829 802 MobiDBLite consensus disorder prediction 584 624 - -
Sto4g1829 802 MobiDBLite consensus disorder prediction 661 696 - -
Sto4g1829 802 Pfam X8 domain 720 791 IPR012946 -
Sto4g1829 802 PANTHER METAL TRANSPORT PROTEIN 23 147 - -
Sto4g1829 802 PANTHER METAL TRANSPORT PROTEIN 146 288 - -
Sto4g1829 802 MobiDBLite consensus disorder prediction 375 413 - -
Sto4g1829 802 SMART X8_cls 720 800 IPR012946 -
Sto4g1829 802 MobiDBLite consensus disorder prediction 296 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g1829 Sto-Chr4 18872260 18912433 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g1829 4 18872260 18912433 Sto4g1829 4 18872260 18912433 ECH