Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0791 TTGTTCAACAGATGGGGCAAATCCGCAGTAGAAAACGTTTGGAATATAAGCGGCGAACTATGCAGTGGAAATGCCATCGACGACACCACCCAAACTGAAGCCTACAATCCATTCATCAAATGCGTTTGTACCAATGGAACTTGCCACATCACTGCACTGAGGGTTTATGCATTGGATATTGTTGGGGATATCCCAGAAGAGCTATGGACTCTGACCCACCTCACCAATTTGTATGCTTGCTTAATTTCGCCCTCGTCAATTTTCCAAACTAGGAACCTTGGCCAGAATTACTTGACCGGCACTCTACCTCCAGCCATTGGAAATTTGACTGACATGCAATACTTGAGCTTGGGCATCAATTCTTTGTCAGGGGAGCTTCCAAAGGAACTGGGAAATCTTACTGAGTTATTAATATTGGGTCTTGGGACAAACAACTTTTCAGGTTCTCTTCCATCTGAACTAGGGAATCTTTTGAAATTAGAACAACTCTACCTAGATAGTTCTGGATTTAGTGGTCAGATTCCTCCCACTTTTGCTAATCTTAAAAACCTGGTAACAGTATGGGCTTCAGACATGAATCTCACAGGCCAGATCCCTGACTTCATAGGAAATTGGTCCAAGTTGACAACCTTGAGGTTTCAGGGTAATTCTTTTGAAGGCCCAATACCATCATCGTTTTCCAATCTGACTTCTCTTACAGAATTGAGAATAAGTGAAATTTCTAATGGGAGCTCCTCACTGGCATTTGTAAGGAATATGAAGTCTTTGACTGTCCTAGTACTGAGGAACAACAATATTTCTGATTCAATTCCATCCAACATTGGtgaatttcaaaatttgacCCAGTTGGATTTGAGCTTCAATAATATCACAGGACAGATCCCGGAAACACTTTTCAATTTGAGTTCACTCCAATACCTGTTTCTTGGAGATAACAAACTCAACGGTACAATCCCTACCCAGATAGGCTCGACTCTTCGCAATATGTGA 990 0.4121 LFNRWGKSAVENVWNISGELCSGNAIDDTTQTEAYNPFIKCVCTNGTCHITALRVYALDIVGDIPEELWTLTHLTNLYACLISPSSIFQTRNLGQNYLTGTLPPAIGNLTDMQYLSLGINSLSGELPKELGNLTELLILGLGTNNFSGSLPSELGNLLKLEQLYLDSSGFSGQIPPTFANLKNLVTVWASDMNLTGQIPDFIGNWSKLTTLRFQGNSFEGPIPSSFSNLTSLTELRISEISNGSSSLAFVRNMKSLTVLVLRNNNISDSIPSNIGEFQNLTQLDLSFNNITGQIPETLFNLSSLQYLFLGDNKLNGTIPTQIGSTLRNM 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0791 329 ProSiteProfiles Leucine-rich repeat profile. 279 301 IPR001611 GO:0005515
Sto4g0791 329 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 328 - -
Sto4g0791 329 Pfam Leucine Rich Repeat 207 229 IPR001611 GO:0005515
Sto4g0791 329 SUPERFAMILY L domain-like 56 323 - -
Sto4g0791 329 Pfam Leucine rich repeat 255 314 IPR001611 GO:0005515
Sto4g0791 329 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 69 328 - -
Sto4g0791 329 Gene3D Ribonuclease Inhibitor 163 329 IPR032675 -
Sto4g0791 329 Gene3D Ribonuclease Inhibitor 42 162 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0791 Sto-Chr4 5750216 5753271 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0791 112 329 Receptor kinase-like Gene Family AT1G56120 60.550 5.74e-84 269