Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0782 atggacatatcCCAACGAATAGAAGAAAGGAATGAGGTGGTGGACTGCATGAGGGAGGAGAAACTTAAAAACGCTCTTAAGCCCATCCAACTACCTAAATGGAATAGCGGGCCATTCAAGCCCAACTTCACTAAGGCTATCACTACACCTTTTAACTGGACGCAACCTAATGCAGCACCGACGACTAAGACATCCGAGGTCAAGGGAAGTACTGACAAGAAGGGTAGCGTGGCAACGACTTCATCCAGCAAGAAGAATTACAGGCGTCTGATCGATGAAGAGATGAAACGGAAGCGCGAGCTAGGTGAGTGTTTCACCTGTGACGAAAAGTGGAGCCCAACGCATCAGTGCAAGAACAAGAGGATAAACCTCATCATCCTCTCTGAGCTCGAGGACGAAGAGGACGACAGGGATGAGTGCCCAGCTAAGATTGAGGAAGAGAAGGACGGGAAACTCGCGGGAACACTGATGTCCTTGTCTGTAAACTCGGCTGTGGGGATTACCAGAGGAAGGACAATGAAGTTAGTGGGGAAAATCCGTGGTAATGAGATAATAATTATGATCGACAGTGGCGCCactcataattttatttctacTGAATTGGTGAAGAAGCTGGGTTTAGAGGTGGAAAAGACAAGGGCTTGTAGAGTTACCTTGGGAGATGGGTACAGTCTTCAGCAAGAAGATTACAACTTTGGAATTAAGTGCGGTGGTGGTCCAATTACATCATCAAAGGGAATTACATATGAAATGGATAATGCGACACTTGGTCCTGCTACTTATTGTGTTACTGATACAAAAAGATGGGCATTTTTTGGTACTGTGGACACAGAGCTTTTCCAGACAGCACGACTCTCTGCTTCCTCATTAAGATATTATGGCCTGGGGCTGGAGAATGGCGATTACAACATCACCCTGCAATTCGCAGAAATAACATTTCCAGATTCTAGTACCACATGGAAAAGACTTACAAGACGGGTCTTTGATATATACGTTCagGGGAATCGTGTTCTGAAGGATTTTGACATACAAAAGAAAGCTGGGGGATCCTCTTTTAAAGCTGTTCAGGAGGTATTTCGGGTTAAAGTGTCAGAAAACCATGTTGTGATCCATCTCTTTTGGGCTGGAAAAGGGACTTGCTGCATACCAAGTCAGGGTACTTATGGCCCTCTAATTTCGGCAATCAGTGTTGTACCAGatTTCATACCCACTGTCAGTAATGAACCTCCAACTACAACTGATAAAAAGAACAGAACCGGTCTGATTGTGGGAATCGTTGTTGGTGTTGGAGTTGTAAGCTTTTTTTCTGTTGCGGTTTTCTGTATCATTCGGAGAAGAAAGCATTGTGTAGATGGTGAGGAAGAGTTTTTAGGTATTGATGCAAAGCCATACATTTTCAGCTATTCTGAGTTAAAAAATGCCACATCTGACTTCAATCCTGGCAACAAACTTGGAGAAGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGATGGAAGACTCATTGCTGTGAAACAACTATCTGTGGCATCTCATCAAGGAAAGAACCAGTTCATAGCTGAGATTACCACTATATCTGCCGTGCAACATCGCAATCTTGTTAAATTACATGGGTGTTGCATTGAAGGGACAAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATTGTTATACTCTCAAATGGCTCACACGCTATGATATCTGCATGGGTGTAGCAAGAGGTTTAGCTTATCTTCATGAAGAGTCACAACCCCGTATTGTACACCGTGACATTAAGGCTAGTAATATTCTGCTTGATCATGAGCTTGTTCCTAAAATATCTGATTTTGGCTTGGCAAAATTATATGAGGATAATAAAACCCATATTAGCACCCGTGTGGCTGGGACAATTGGATATCTTGCTCCAGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGTGTTGTGGCTCTAGAAATTGTTAGTGGGAGGCCGAATTCTGATCCGAGCTtggaaggagagaagatgtATCTTCTAGAATGGGATCCACAGGCTTGGCATCTGCATGAAAACAACCGTGTAGTTGAACTGGTAGATCCTAGACTGTCATCAGATTTCAATGAGGAACAAGTTAGAAGAATTGTAGGAATATCTCTTCTGTGCACTCAAACATCACCGTCGTTAAGGCCATCGATGTCTTGTGTGGTGGCGATGCTCTCCGGAGATATTGAAGTGAGCACTGTAACTTCAAGGCCTGGATACTTGACAGACTGGAAATTTGATGATGTGACCAGCTTCATCACTGGTTTTGCAACTAAGGGATCAGATACAAGTCAATATAACTCATCAGCAAGTACCAGCATAGTTGGTGGTGCAACCCAATCACCTTCCAGACCCATCCTTCAACACAGTCTTAGTGAGGGTAGATCAGATACAAGGAACCTCTCACATACATGTCCAGTTTTTTTCAAATGTATTCTTTTTTCCATAGTAATGATCTTGGCTAGGAAACACCAAGTTCTTTCATACTGCCACAATGGTCGTCGTAAACGCAACAAGATTGAGGCCCGTATGAATAATGCAATTGATTACTTCCATGACCTTTACAGTGATGATGACAAGGATGCTCTCTGGGCTCGTGTGCTTAGAGGCAAGTATCATTGTGGTGGTGATGATCTCATCCCTCAAATGAAGTGTTCCAGCAATTCTTCCAGACTCTGGAAGGCGGTGGTTCGCAATTGGGATCATGTTAATGATGGCATGGAGTGGCGGGTTGGTAACGGTGCGTCTATTAATTTTTGGACGGACTGTTGGGTCCCGAATTACAATCGGCTTTGTGATATTGTTACTGATCCTATTCCGAGTGATGATATCTTAAGCGCTAAGGTCTCAAAGTATGTCACCCCTTCAGGTGAGTGGAATTTGAACCAATTTCAGTTTCTTATCCCTGATCATGCCAGATTAAAAATAGCGGCTATTCTGCCTCCTTCGGATGGTAATGGGCAGGATAAGTTAGCTTGGAAGTTTAGCAAGGACGAAGGTTTGGGTATGAATGAGGGGGTTGAGGATAAATTTTGGAGGAAGGTGTGGCACCTAAAGGTGCCTCAACGAGTCAAATCCTTTATTTGGCTGTGTGGGCATAATAAACTCTTGACTAATTTTGAGAGGGTCAAATGCTGCATGACCGATTTTTCTATGTGCACTGGATGCAACAGTGGCAGTGAGGATGCTCTGCATGCTCTTCGAGATTCTCCTAGAGTGAAACCTTGTCACTGGCCTTTCTTTTTCAGCTATAAAGGTACCTTTATAGCTGGTTGA 3348 0.428 MDISQRIEERNEVVDCMREEKLKNALKPIQLPKWNSGPFKPNFTKAITTPFNWTQPNAAPTTKTSEVKGSTDKKGSVATTSSSKKNYRRLIDEEMKRKRELGECFTCDEKWSPTHQCKNKRINLIILSELEDEEDDRDECPAKIEEEKDGKLAGTLMSLSVNSAVGITRGRTMKLVGKIRGNEIIIMIDSGATHNFISTELVKKLGLEVEKTRACRVTLGDGYSLQQEDYNFGIKCGGGPITSSKGITYEMDNATLGPATYCVTDTKRWAFFGTVDTELFQTARLSASSLRYYGLGLENGDYNITLQFAEITFPDSSTTWKRLTRRVFDIYVQGNRVLKDFDIQKKAGGSSFKAVQEVFRVKVSENHVVIHLFWAGKGTCCIPSQGTYGPLISAISVVPDFIPTVSNEPPTTTDKKNRTGLIVGIVVGVGVVSFFSVAVFCIIRRRKHCVDGEEEFLGIDAKPYIFSYSELKNATSDFNPGNKLGEGGFGPVYKGTLNDGRLIAVKQLSVASHQGKNQFIAEITTISAVQHRNLVKLHGCCIEGTKRLLVYEYLENKSLDQALFGNCYTLKWLTRYDICMGVARGLAYLHEESQPRIVHRDIKASNILLDHELVPKISDFGLAKLYEDNKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALEIVSGRPNSDPSLEGEKMYLLEWDPQAWHLHENNRVVELVDPRLSSDFNEEQVRRIVGISLLCTQTSPSLRPSMSCVVAMLSGDIEVSTVTSRPGYLTDWKFDDVTSFITGFATKGSDTSQYNSSASTSIVGGATQSPSRPILQHSLSEGRSDTRNLSHTCPVFFKCILFSIVMILARKHQVLSYCHNGRRKRNKIEARMNNAIDYFHDLYSDDDKDALWARVLRGKYHCGGDDLIPQMKCSSNSSRLWKAVVRNWDHVNDGMEWRVGNGASINFWTDCWVPNYNRLCDIVTDPIPSDDILSAKVSKYVTPSGEWNLNQFQFLIPDHARLKIAAILPPSDGNGQDKLAWKFSKDEGLGMNEGVEDKFWRKVWHLKVPQRVKSFIWLCGHNKLLTNFERVKCCMTDFSMCTGCNSGSEDALHALRDSPRVKPCHWPFFFSYKGTFIAG 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0782 1115 Gene3D - 227 400 - -
Sto4g0782 1115 ProSiteProfiles Protein kinase domain profile. 478 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0782 1115 Pfam zinc-binding in reverse transcriptase 1031 1095 IPR026960 -
Sto4g0782 1115 Pfam Aspartyl protease 177 222 - -
Sto4g0782 1115 SMART serkin_6 478 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto4g0782 1115 SUPERFAMILY Protein kinase-like (PK-like) 462 774 IPR011009 -
Sto4g0782 1115 CDD retropepsin_like 175 222 - -
Sto4g0782 1115 Pfam Protein tyrosine and serine/threonine kinase 481 748 IPR001245 GO:0004672|GO:0006468
Sto4g0782 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Sto4g0782 1115 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 263 809 - -
Sto4g0782 1115 Gene3D Phosphorylase Kinase; domain 1 453 553 - -
Sto4g0782 1115 MobiDBLite consensus disorder prediction 50 84 - -
Sto4g0782 1115 CDD STKc_IRAK 484 749 - -
Sto4g0782 1115 Gene3D Transferase(Phosphotransferase) domain 1 554 760 - -
Sto4g0782 1115 PANTHER BNAC03G71060D PROTEIN 263 809 - -
Sto4g0782 1115 Pfam Malectin domain 232 395 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0782 Sto-Chr4 5660125 5673834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0782 230 819 Receptor kinase-like Gene Family AT1G56120 61.066 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Sto4g0782 PK_Tyr_Ser-Thr 2.2e-47 CL0016