Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0778 CTGTCTAGACATCTTCATGCGACTGATGCTCAAAGTATTATTGAAGAAATCCAGAGTGTCATTGGTGGCTTCGATCGTGTGCGTATTCAGCATAGATGGAGGGAAGCTAACATGTGTGCGGACCACCTTGCTAATTTGGGCATTTCTAGTGATTACCATAGGGTCATTCTTGCTGAACCTCCTCCTGACATGAGGCTCAAGCTTTTTGCTGATGTTATGGGCACTAAGTTGCCCCGTGTGACTTTGCTATGGGGCAAATCCGCGGTAGAAAACGTTTGGAATATAAGCGGCGAACTATGCAGTGGAAATGCCATCGACGACACCACCCAAACTGAAGCCTACAATCCATTCATCAAATGCGTTTGTACCAACGGAACTTGCCACATCACTGCACTGAGGGTTTATGCATTGGATATTGTTGGGGATATCCCAGAAGAGCTATGGACTCTGATTCACCTTACCAATTTGAACCTTGGCCAGAATTACTTGACCGGCACTCTACCTCCAGCCATTGGAAATTTGACTGACATGCAATACTTGAGCTTGGGCATCAATTCTTTGTCAGGGGAGCTTCCGAAGGAACTGGGAAATCTCACTGAGTTATTAGTATTGGGTCTTGGGACAAACAACTTTTTAGGTTCTCTTCCATCTGAACTAGGGAATCTTTTGAAATTAGAACAACTCTACCTAGATAGTTCTGGATTTAGTGGTCAGATTCCTCCCACTTTTGCTAATCTTAAAAACCTGATAACAGTATGGGCTTCAGACATGAATCTCACAGGCCGGATCCCTGACTTCATAGGAAATTGGTCCAAGTTGACAACCTTGAGGTTTCAGGGTAATTCTTTTAAATGTCCAATACCATCATCGTTTTCCAATCTGACTTCTCTTACAGAATTGAGAATAAGTGAAATTTCTAATGGGAGCTCCTCACTGGCATTTATAAGGAATATGAAGTCTTTGACTGTCCTAGTACTGAGGAACAACAATATTTCTGATTCAATTCCATCCAACATTGGtgaatttcaaaatttgacCCAGTTGGATTTGAGCTTCAATAATATCACAGGACAGATCCCGGAAACACTTTTCAATTTGAGTTCACTCCAATACCTGTTTCTTGGAGATAACAAACTCAATGGTACAATCCCTACCCAGATAGGCTCGACTCTTCGCATTATTGATTTGTCATACAACTCTCTATCTGGGAGCCTCCCTTCTTGGGTAAACCAGCAAAATTTACAACTCTTTACTTTTCAACTCTCAAACCCTCTCTGCTTCTTAGAATATTCAGTTCTTCATGTACTTCTTGTCTTCTAA 1320 0.4144 LSRHLHATDAQSIIEEIQSVIGGFDRVRIQHRWREANMCADHLANLGISSDYHRVILAEPPPDMRLKLFADVMGTKLPRVTLLWGKSAVENVWNISGELCSGNAIDDTTQTEAYNPFIKCVCTNGTCHITALRVYALDIVGDIPEELWTLIHLTNLNLGQNYLTGTLPPAIGNLTDMQYLSLGINSLSGELPKELGNLTELLVLGLGTNNFLGSLPSELGNLLKLEQLYLDSSGFSGQIPPTFANLKNLITVWASDMNLTGRIPDFIGNWSKLTTLRFQGNSFKCPIPSSFSNLTSLTELRISEISNGSSSLAFIRNMKSLTVLVLRNNNISDSIPSNIGEFQNLTQLDLSFNNITGQIPETLFNLSSLQYLFLGDNKLNGTIPTQIGSTLRIIDLSYNSLSGSLPSWVNQQNLQLFTFQLSNPLCFLEYSVLHVLLVF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0778 439 ProSiteProfiles Leucine-rich repeat profile. 344 366 IPR001611 GO:0005515
Sto4g0778 439 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 166 420 - -
Sto4g0778 439 Gene3D Ribonuclease Inhibitor 309 430 IPR032675 -
Sto4g0778 439 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Sto4g0778 439 SMART LRR_typ_2 198 222 IPR003591 -
Sto4g0778 439 SMART LRR_typ_2 366 390 IPR003591 -
Sto4g0778 439 SMART LRR_typ_2 150 174 IPR003591 -
Sto4g0778 439 SMART LRR_typ_2 318 342 IPR003591 -
Sto4g0778 439 Gene3D Ribonuclease Inhibitor 102 237 IPR032675 -
Sto4g0778 439 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 166 420 - -
Sto4g0778 439 Gene3D Ribonuclease Inhibitor 238 308 IPR032675 -
Sto4g0778 439 Pfam Reverse transcriptase-like 6 46 IPR002156 GO:0003676|GO:0004523
Sto4g0778 439 SUPERFAMILY L domain-like 126 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0778 Sto-Chr4 5600031 5610448 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0778 177 416 Receptor kinase-like Gene Family AT1G56120 60.833 2.77e-91 293