Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0770 ATGGCCGTGCCGGCAATTATTTCTTCTAATAACTCAGCGGCGGCCGGAGCCAATAATAATGGCATTAATGGAGGATACCCTATTCTACCACTTCATTTGGGCGAGTTTGGAGAAGAATGTTGTGGCTTTGTGGATGATATTAAGCCACCAATAACGTCATCATCATCGTATCCTAATAATACACCCACAGAAACTTGGggtggtggagtgGAAGAAAGCAACAATATAAAAGTAGGGAGATACTccgaagaagaaaggaaggaaagaaTTGTGCGgtatttgaagaaaagaaaccaacGCAATTTCAACAAAACCATCAAGTATGCTTGTCGGAAAACCCTAGCTGATCggagagtgagagtgagggGAAGATTTGCAAGAAACAACGAGCTGTGTGAGGATGAAATCAGTACAATCAAAAAGATGAATGACAATCTTCCTCACAAACACGACTTGTACTatgctcatcatcatcatgattcTATCCAATTTCAGAATGAGGATGATGAAGATGACTGGTTGCAAGAGGCCATGGCTAGTTTGGTGTATCTATCTCATTCTTCGCCTGAAGAAATATAg 579 0.3368 MAVPAIISSNNSAAAGANNNGINGGYPILPLHLGEFGEECCGFVDDIKPPITSSSSYPNNTPTETWGGGVEESNNIKVGRYSEEERKERIVRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELCEDEISTIKKMNDNLPHKHDLYYAHHHHDSIQFQNEDDEDDWLQEAMASLVYLSHSSPEEI 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0770 192 Pfam CCT motif 86 128 IPR010402 GO:0005515
Sto4g0770 192 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 187 - -
Sto4g0770 192 MobiDBLite consensus disorder prediction 52 70 - -
Sto4g0770 192 ProSiteProfiles CCT domain profile. 86 128 IPR010402 GO:0005515
Sto4g0770 192 MobiDBLite consensus disorder prediction 52 72 - -
Sto4g0770 192 PANTHER ACTIVATOR OF SPOMIN::LUC2 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0770 Sto-Chr4 5471098 5472422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0770 82 136 C2C2-CO-like Transcription Factor Family AT5G57660 47.273 2.28e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto4g0770 CCT 1.2e-16 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0770 4 5471098 5472422 Sto4g0770 4 5471098 5472422 ECH