Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0768 ATGTCGTCGCCATGCGCAGCGTGCAAGCTTCTCCGTCGTCGATGTGCTCAGGACTGCCTCTTCGCTCCGTATTTTCCGGCCGATGAACCCCAAAAGTTTGCAAGTGTCCACAAGGTTTTTGGTGCTAGCAATGTCAACAAAATGTTACAGGAGCTAGGAGAAGAGCAAAGAAGTGACGCAGTGAGTTCAATGGTGTACGAAGCAAATGCAAGAGTGAGGGATCCTGTGTATGGCTGTGTGGGTGCCATTTCCTCTCTTCAGCAACAAGTAGACACACTTCAGACTCAACTCGCTCAGGCTCAAGCCGAGCTTGTTCACATCAGAATGACCCATTTCatcaattcttcttcttcttcatcatcacattcacaccaaccaccaccatcatcatcatcttcttccctCTTTTCCATCGACAATAATATGGGCCACTACTCCTTGTGGTCTTGCTAG 453 0.4194 MSSPCAACKLLRRRCAQDCLFAPYFPADEPQKFASVHKVFGASNVNKMLQELGEEQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQVDTLQTQLAQAQAELVHIRMTHFINSSSSSSSHSHQPPPSSSSSSLFSIDNNMGHYSLWSC 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0768 150 MobiDBLite consensus disorder prediction 115 135 - -
Sto4g0768 150 ProSiteProfiles LOB domain profile. 3 104 IPR004883 -
Sto4g0768 150 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 2 131 - -
Sto4g0768 150 Coils Coil 83 110 - -
Sto4g0768 150 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
Sto4g0768 150 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0768 Sto-Chr4 5432789 5437158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0768 3 150 AS2 family AT1G16530 60.123 8.66e-64 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto4g0768 LOB 4.7e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0768 4 5432789 5437158 Sto4g0768 4 5432789 5437158 ECH