Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0767 ATGAATCATTCCCGCaatgtaaAAAGTAGTAGCACAGGAGAGAAAGAAGGGTATTTCTATTGCAAGAGAGGGAGGAAGTACAGGAATAGCATAAGGCCAAATAGAGTGACAGGATCAGGATTCTGGAAAGCCACTGGAATAGACAAGCCAgtttatgataataataatgacTCCATCATTGGCCTCAAGAAGACACTTGTCTACTACCGCGGCTCCGCAGGCAAAGGCACCAAGACCGAATGGATGATGCACGAGTTTCGCCAtccacccaccaccaccgccaccgccaACAACAAAACTCATAtcaataataacattaatattcCCCAAGAAgctGAAATCTGGACATTGTGTAGAATATTCAAGAGGAATGCGTCACACAGAAAGTGTGCACCTGCAGATCATTGGAGACACTTTGGTGGTAATAAGCGTCATTCATCTCAAGATCAGAAGAGCAATAATAGTACTGTGACCACTGTGGATCAGTCTTCTGCTATTACCACTGACAATGATAAGCCACAAACATACATCAACTTTGGTGGCACTCACAGTGATAATAATAATGACACCTTCTTCCAGCAAGAGCACAAGCCcctcattaataataataataataggattaattattattataatcatcatcatcagGTGGCTACCAATAATAATAGTAGTAATGACTTGTTTGCATTTGAGAACTCTTCATGGGATGAGCTTGGATCTGTTGTCCAGTTTCCTCTTTGA 741 0.3563 MNHSRNVKSSSTGEKEGYFYCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYDNNNDSIIGLKKTLVYYRGSAGKGTKTEWMMHEFRHPPTTTATANNKTHINNNINIPQEAEIWTLCRIFKRNASHRKCAPADHWRHFGGNKRHSSQDQKSNNSTVTTVDQSSAITTDNDKPQTYINFGGTHSDNNNDTFFQQEHKPLINNNNNRINYYYNHHHQVATNNNSSNDLFAFENSSWDELGSVVQFPL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0767 246 MobiDBLite consensus disorder prediction 146 174 - -
Sto4g0767 246 PANTHER CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED 9 223 - -
Sto4g0767 246 MobiDBLite consensus disorder prediction 136 174 - -
Sto4g0767 246 SUPERFAMILY NAC domain 11 123 IPR036093 GO:0003677|GO:0006355
Sto4g0767 246 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 223 - -
Sto4g0767 246 Gene3D NAC domain 3 129 IPR036093 GO:0003677|GO:0006355
Sto4g0767 246 ProSiteProfiles NAC domain profile. 1 123 IPR003441 GO:0003677|GO:0006355
Sto4g0767 246 Pfam No apical meristem (NAM) protein 10 87 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0767 Sto-Chr4 5387352 5388954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0767 23 242 NAC Transcription Factor Family AT2G43000 40.598 5.00e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto4g0767 NAM 3.4e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto4g0767 4 5387352 5388954 Sto4g0767 4 5387352 5388954 ECH