LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto4g0412	ATGGTGGAACTCTACGAAGAGACTGGACATCCATTGGGTGAAGTAGAATCCGAAGAAGAAGATATCGACTATGAGCAGCTCAAGAAGCGGATGTGGAAGGATCGCTTACTACTACAGAAGATGAAGGAGAAACGCCACAAAGACTACGAGCCCGACCAGAAGGCAAAACAAGAAGCTTCTAGACGCAAGAAACTGTCGCGAGCACAGGATTCCATCCTCAAGTACATGGTGAAGATCATGGAAGTGTGCAACGCCAAAGGTTTCGTCTACGGCATTGTCCCCGACAAGGGAAAGCCCATCACCGGATCCTCCGACAGCCTGCGGGAGTGGTGGAAGGACCAAGTCCGCTTTGACCAAAATGCCCCCGACGCCATTGAGAAGTTCCTTCCAGTACTCCTTGAGAAAGCTGAGCTGGACGAAGCTTCGTATATTCACCTCCTTCATGACTTGCAAGACACCACCTTGGGATCTCTCCTTTCTGCTTTAATGCAACATTGTGTGCCTCCCCAGAGGAAGTTCCCTTTAGAGAGAGGCTTGGCTCCTCCGTGGTGGCCCACAGGGAAGGAACTGTGGTGGGTCATCAAGCACATGTCTCCTGATTTGAACAAACTAAGGAAGCTAGTGACCCAATCCAAGTCTCTCCAAGACAAGATGACGGCCAAAGATTCTGCAACGTGGTCCAAAGTGGTGAACCAGGAGGAAGCACTACTTCAGCTCACTAACAAGTGCCTCAAGATATCATCACCATCCTCGGAAGATCAAGAAGATGAAGCCTCTTCATCTACTACAAGTGTCGGGAGTAGTGAGGGCAATGAGAAGAGGAAGTATCCGTTTGATCAAGACCATTCATCCATGATTCAGAAGTTGTATGCTTGTCAAAATGAAGATTGTCCACAGAGTGAACTGAGTCTAGGATTCGTAGACAAGAATGCCAGGCAGAACCATGAGTCTCAGATTTATGGACCACATACATTTGAGGTCCAAGAATGGTTCTACCCAAAGGAGTGTATTGGAAAGCAGATGCATGCAAATGAATCAAATATAtcatcacaaaaagaaaaacaattgaCGAGGAGTGATGTGAAAGCCAATGAAGACAGACTGAATCTGACCAAAAAAGTGGTGGAAGATTCGTTCTTGCCTATGCTCAAGGATGATGAAATTGTGACCCGTGGTATTCCCGTGACTGGTTATGACAAATATGGTAATGCATATTCCTTCAACTTTATCTTATGGGCAAACAAGCTTTATGTGCTGAATGGAGAATGGCAGAATATTTTATGTGACAGCATGAATGAAGGCATTAGTATCATATGTGGTGTGGCTGGAGCATTGGATTATGTGCACAAAAGAAAAGAGCTTAATGCTGGAAAGTGCTCAAGGTGCTTACAGGGGAGCAAgtcatga	1407	0.452	MVELYEETGHPLGEVESEEEDIDYEQLKKRMWKDRLLLQKMKEKRHKDYEPDQKAKQEASRRKKLSRAQDSILKYMVKIMEVCNAKGFVYGIVPDKGKPITGSSDSLREWWKDQVRFDQNAPDAIEKFLPVLLEKAELDEASYIHLLHDLQDTTLGSLLSALMQHCVPPQRKFPLERGLAPPWWPTGKELWWVIKHMSPDLNKLRKLVTQSKSLQDKMTAKDSATWSKVVNQEEALLQLTNKCLKISSPSSEDQEDEASSSTTSVGSSEGNEKRKYPFDQDHSSMIQKLYACQNEDCPQSELSLGFVDKNARQNHESQIYGPHTFEVQEWFYPKECIGKQMHANESNISSQKEKQLTRSDVKANEDRLNLTKKVVEDSFLPMLKDDEIVTRGIPVTGYDKYGNAYSFNFILWANKLYVLNGEWQNILCDSMNEGISIICGVAGALDYVHKRKELNAGKCSRCLQGSKS	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto4g0412	468	MobiDBLite	consensus disorder prediction	247	278	-	-
	Sto4g0412	468	SUPERFAMILY	DNA-binding domain of EIN3-like	144	237	IPR023278	GO:0003700\|GO:0005634
	Sto4g0412	468	Gene3D	-	342	431	IPR015300	-
	Sto4g0412	468	MobiDBLite	consensus disorder prediction	1	20	-	-
	Sto4g0412	468	MobiDBLite	consensus disorder prediction	43	64	-	-
	Sto4g0412	468	Pfam	Ethylene insensitive 3	25	192	IPR006957	GO:0005634
	Sto4g0412	468	Pfam	Ethylene insensitive 3	193	234	IPR006957	GO:0005634
	Sto4g0412	468	MobiDBLite	consensus disorder prediction	247	270	-	-
	Sto4g0412	468	PANTHER	ETHYLENE INSENSITIVE PROTEIN	193	318	-	-
	Sto4g0412	468	PANTHER	ETHYLENE INSENSITIVE PROTEIN	14	192	-	-
	Sto4g0412	468	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	193	318	IPR006957	GO:0005634
	Sto4g0412	468	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	14	192	IPR006957	GO:0005634
	Sto4g0412	468	Gene3D	-	142	193	IPR023278	GO:0003700\|GO:0005634
	Sto4g0412	468	Gene3D	-	194	243	IPR023278	GO:0003700\|GO:0005634
	Sto4g0412	468	Gene3D	-	54	138	IPR023278	GO:0003700\|GO:0005634

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto4g0412	Sto-Chr4	3202883	3211220	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto4g0412	1	321	EIL Transcription Factor Family	AT5G10120	53.022	5.38e-113	339

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	EIL	Sto4g0412		EIN3	1.3e-79	No_clan