Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0190 ATGAAGATGTTACAGAGACTTGTCCCTGGTTGTGATAAGGTAACTGGGAAGGCCCTCATGTTGGATGAAATAATCAATTATGTTCAGTCCCTACAAAATCAAGTGGAGTTCTTGTCAATGAAGCTTGCTTCTGTGAATCCCATGTTTTATGACTTCTCAATGGACATAGATACTCTCATGGTTAGACCAGAGGTAAGTGATGTACGCAGTTTTACTCTTATATCTCTGCAAGCAAGCAGAGATGGAAACAACCAAGTGACAACATTTGCTGATACAACCACAACCTCTGCCTTTCACACTACTAATGTTGTAAATGACTATGTTTTGGACAATTCAGCTTCAATTAGCTTGATTCAAGGACAAAGGTCAAATGTTTTCTGCGAggATGGTGGTAGTCAATTCTGGGACGTGGAAGACCAACGACACAAGTTGTTTCATCCATATGGGATCACCAACAACACCTTGTGTTCCTTTCATTAA 480 0.3979 MKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFSMDIDTLMVRPEVSDVRSFTLISLQASRDGNNQVTTFADTTTTSAFHTTNVVNDYVLDNSASISLIQGQRSNVFCEDGGSQFWDVEDQRHKLFHPYGITNNTLCSFH 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0190 159 Gene3D - 1 50 IPR036638 GO:0046983
Sto4g0190 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 31 IPR011598 GO:0046983
Sto4g0190 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 48 IPR036638 GO:0046983
Sto4g0190 159 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 159 - -
Sto4g0190 159 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 159 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0190 Sto-Chr4 1424635 1425590 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto4g0190 1 112 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 50.893 3.92e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto4g0190 - - gmx:100806696 188.734