Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto4g0061 ATGACGACTCGGAACATTGAGAAGATGGCTTCAATTGATGCTCAATTGAGATTACTGGCACCGGGAAAGGTGTCTGACGATGATAAGCTAGTCGAATATGATGCCTTGTTGCTAGACCGCTTTCTTGACATTCTTCAGGACCTACATGGTGAAGACATCAGAGAAACGGTTCAAGAGTGCTATGAGCTGTCAGCTGAGTATGAAGGGAAGCATATCCCTCAGAAATTGGAGGAGCTTGGAAACATGCTGACTGGTCTTGATGCTGGGGACTCTATAGTGATAGCTAAATCATTTTCTCACATGCTTAATTTGGCCAACTTGGCAGAGGAAGTTCAGATAGCCTACCGGAGAAGGATCAAATTATTAAAGAAGGGTGATTTTGCTGATGAGAACTCTGCCATCACTGAATCAGACATTGAAGAGACCTTCAAGAGGCTTGTGAATCAACTGAAGAAGACCCCAGAGGAAGTCTTTGACGCTTTGAAGAACCAAACTGTAGATTTGGTGCTGACTGCTCATCCTACTCAATCTGTTCGTAGATCTTTGCTACAAAAGCATGCCAGGTTTGTTCATTCTGTAGCgaTAAGGAATTGCTTAACTCAATTGTATGCTAAAGATATAACACCTGATGATAAGCAGGAACTAGATGAGGCTTTACAGAGAGAGATTCAAGCTGCATTTCGTACAGATGAAATTAGAAGAACTCCTCCTACGCCACAAGATGAGATGAGGGCAGGAATGAGTTACTTTCATGAGACAATCTGGAAAGGTGTACCAAAGTTTTTGCGACGGGTTGACACAGCTCTGAAGAACATTGGAATAAATGAACGTGTGCCATATAATGCACCTCTTATTCAATTCTCTTCTTGGATGGGAGGGGATCGTGATGGAAATCCCAGAGTAACCCCCGAGGTTACAAGGGACGTTTGCTTGCTGGCTAGAATGATGGCTGCTAATCTGTACTTCTCTCAGATAGAAGATCTTATGTTTGAGTTGTCAATGTGGCGCTGCAATGATGAGCTCCGTGTTCGTGCTGATGAACTCCATAGTTCTTCAAAGAGAGATGCAAAACATTATATTGAGTTTTGGAAAAAGATTCCTCCAAGCGAGCCTTATCGTGTTATCCTTGGAGACGTGAGGGACAAACTATATAATACTCGCGAACGTGCTCGCCATATACTAGCCAATGGGACCTCTGACATACCTGAAGAGACAACCTTCACAAATGTTGAGCAGTTCCTTGAGCCTCTCGAACTCTGTTATAGGTCACTTTGTGCATGTGGTGACCGACCAATAGCTGATGGAAGCCTCCTTGATTTCTTAAGACAAGTTTCAACTTTTGGACTGTCACTTGTAAGACTTGACATTCGTCAAGAATCAGACAGGCACACTGATGTTATGGATGCAATTACAAAGCACTTGGGTATTGGATCTTATAGAGAATGGTCTGAGGAACGCAGACAGGAATGGCTCTTGTCTGAGCTCAGTGGCAAGCGTCCTCTTTTCGGTCCTGATCTCCCTAAAACTGATGAAATTGCTGATGTATTGGAAACCTTCCATGTCATTTCAGAACTTCCATCAGACAATTTTGGTGCCTATATCATCTCAATGGCTACATCCCCATCTGATGTGCTTGCTGTAGAACTTTTACAACGTGAATGTCATGTGAAAAAGCCATTAAGGGTTGTCCCATTGTTTGAAAAGCTTGCTGATCTTGAGGCTGCTCCTGCAGCAGTTGCCCGTCTATTCTCTATAGATTGGTACAGAAACCGTATCAATGGGAAGCAAGAAGTAATGATAGGATACTCAGACTCAGGAAAAGATGCTGGCCGTCTTTCTGCAGCTTGGGCGCTGTACAAGGCTCAAGAAGAGCTCATAAAGGTTGCAAAGGAGTTTGGTGTGAAGCTTACAATGTTCCATGGCAGAGGAGGGACTGTTGGAAGAGGAGGTGGTCCCACTCATCTTGCCATACTATCTCAGCCACCAGAGACCATTCATGGGTCACTTCGTGTAACAGTTCAAGGTGAAGTTATTGAGCAGTCATTTGGAGAAGAGCACTTGTGCTTTAGAACGCTTCAGCGTTTCACTGCTGCAACACTTGAGCATGGCATGCATCCTCCTGTGTCTCCAAAACCAGAATGGCGCTCCCTCATGGAAGAGATGGCAGTTATTGCAACAAAGGAGTATCGTTCCATTGTTTTCCAGGAACCCCGTTTTGTTGAGTACTTCCGTTGTGCAACACCTGAGTTAGAGTATGGACGAATGAATATTGGCAGTCGTCCATCAAAACGAAAGCCAAGTGGAGGCATTGAATCACTTCGTGCTATTCCTTGGATCTTTGCTTGGACCCAAACAAGGTTTCATTTACCAGTTTGGCTTGGGTTTGGTGCAGCATTCAGACATGTAATTGAGAAGGATCCCAAGAATTTACAAATGCTTCAAGATATGTATAATCAATGGCCATTCTTCAGGGTCACCCTTGACTTGGTTGAGATGGTGTTTGCCAAGGGAGACCCAGGGATTGCTGCCCTATATGATAAACTGCTAGTGTCAGGAGACCTATTGCCATTTGGAGAGCGCTTAAGGACTACATTTGAACAAACCAAAAGCCTTCTTCTCCAGATTGCTGGGCACAGGGATCTTCTGGAAGGAGACCCCTACTTAAAGCAAAGACTCCGACTTCGCGATTCCTACATCACCACTCTCAATGTCTTGCAAGCGTACACGTTGAAGCGAATCCGAGATCCCGACTACCATGTGAAGTTGAGGCCGCATCTGTCAAAGGAGTACATGGAAATGGAATCAAGCAAGCCAGCTGCTGAACTTGTAAAACTCAACCCTACAAGTGAGTATGCCCCTGGTCTGGAGGACACCCTTATTTTGACAATGAAGGGTATAGCAGCTGGCATGCAGAACACTGGTTAA 2925 0.4451 MTTRNIEKMASIDAQLRLLAPGKVSDDDKLVEYDALLLDRFLDILQDLHGEDIRETVQECYELSAEYEGKHIPQKLEELGNMLTGLDAGDSIVIAKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETFKRLVNQLKKTPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHARFVHSVAIRNCLTQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDELRVRADELHSSSKRDAKHYIEFWKKIPPSEPYRVILGDVRDKLYNTRERARHILANGTSDIPEETTFTNVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLGIGSYREWSEERRQEWLLSELSGKRPLFGPDLPKTDEIADVLETFHVISELPSDNFGAYIISMATSPSDVLAVELLQRECHVKKPLRVVPLFEKLADLEAAPAAVARLFSIDWYRNRINGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELIKVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRSLMEEMAVIATKEYRSIVFQEPRFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFRHVIEKDPKNLQMLQDMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSGDLLPFGERLRTTFEQTKSLLLQIAGHRDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKRIRDPDYHVKLRPHLSKEYMEMESSKPAAELVKLNPTSEYAPGLEDTLILTMKGIAAGMQNTG 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto4g0061 974 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 598 610 IPR033129 -
Sto4g0061 974 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 974 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 Gene3D Phosphoenolpyruvate/pyruvate domain 315 450 - -
Sto4g0061 974 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Sto4g0061 974 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 974 IPR015813 GO:0003824
Sto4g0061 974 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 974 IPR022805 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 974 - -
Sto4g0061 974 Pfam Phosphoenolpyruvate carboxylase 36 974 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PRINTS Phosphoenolpyruvate carboxylase signature 227 243 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PRINTS Phosphoenolpyruvate carboxylase signature 287 302 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PRINTS Phosphoenolpyruvate carboxylase signature 447 467 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PRINTS Phosphoenolpyruvate carboxylase signature 596 616 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PRINTS Phosphoenolpyruvate carboxylase signature 638 667 IPR021135 GO:0006099|GO:0008964|GO:0015977
Sto4g0061 974 PRINTS Phosphoenolpyruvate carboxylase signature 770 796 IPR021135 GO:0006099|GO:0008964|GO:0015977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto4g0061 Sto-Chr4 517208 523520 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g0463 7 3416747 3419092 Sto4g0061 4 517208 523520 CCT