Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto3g3274 ATGCCTCTTTTAAAAAGAAAGCCTTTTCCCTTGGCTGAGCTTCCTAAGGATTTGGAGCCACATGAGCCTGTTTACCAAGTTCGATTTACCAAAGAAATATTCCGAGATTATCATGATTATTTGAAACGTATAAATTTATATCGCCAGAGAGTTTGGATGTGTAAAGTCACTGGGAAAACTAGCTTGACTTTTGAAGAGGCTATGGTGTCCGAAAAACGTGCTACTGAAAAAGTTCAGCAAATTCCCAAGGAATTAATGGCTCCAGCTCTAAGGATTATTCAGTACAGCATGCTTCCTTTGAGGGATCTTGCCAACACAATAGCTGAAAATTTTTTGGAGCGGTTGTATGTGGGTGCTGAACTGCATGGAAAAAGGGATGATGGAGAACATCCCTGCAAAATATTGAAAGTCATACAGGAAGGAGCTGACAAATTCCGTTATGAGGTTGCTTGGCTCGACAAAAACATGAGTACGACTGAAAAAACAGAAGTCAGTGCTGAAGATTTGGTGCATAAGAAGCAGCCTTTTAGCAGAAACATCTTGAAATCTTTTGTCCGGGAATCTACATATCGGAATGCtccttgggtattacataatgaACTGGCACAAAATTATGGAATCTCGACTGACATCCCGAAGGAGTTAAGAGGAAGAGCTTTCTTCAAAAATGGTCTTTTAATTTGCAACAAGAAGAGGAAAAATGAGGATTTAACTGGAAGAACTGAAAATTGTAAAAGGAAGAAGTCAGAccaggcaaaaactgatgattcAACTTCAGAAAAAGAAAATGACCAATGTAAGGAAGAACCTATTAAATATCCAATTGACGATCTGCTGGTGAAGCCTGGTCCAGATGATCCTGTTTTCACTGATCGTCCATCTCCATCAAGAGACTTCAATGTTCCAATTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTGTACTTCTTTTGGTAGGCTGTTGCACTTGACACCCTACTCTCTAGAAGATTTTGAAAACGCAATCTGCCACAAGGAAAGCAATGTGGTTCTTCTTGTGGAATCTCATGCAGCACTCTTTCGGGTGCTCATGAAAAACGATGGTGAATATACTTCAGCTGTACAGAAAAGAAATCGGAAGTTTAGGATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGATTACGGCACTATGAAGCTACAATTAAAAGGGGACATTATGGCCTTGTTGATGTCAATGCTAAATTAGAAATCTTGCGTGAATTGGTCAATCGAGCCCTTGAAACTTCAATTTTCAGGAAAAAGTTGGATGAAGTCATTGAAGAGCGGCAGGCACTTGGTGTTACTAGAAGGGGGGAAGCACTGGAAGAGGGGAGAAAGAGGAGAGAAGAAAAGGAACGGTTGAAAGCTGAGTTGGACAGCAATGGGAGTACAGATGAGCATTGTCTACAAATTGTTGCAATTGACTCACCAAATAATAATCACAGTATACAGAATGGAGatgtaagaaagaaaagaaaaggagaaaaagaacCGCCTAAGCAAAAAGATGCTTTGGGTGGAAGTATGATCAACCATTCAAACCATGTATCAAAAAAGACACTTAAGAATCTGAGTTTGGAACTGAAAGAACCTGCAGAAAATGGAAAAGAATCATCTAGAAAGGATTTACAGAAGCAACTGAAGAGTGAGAAGGATCCATCAGTGAAGAATAATATAGAACAGAGGAGAGAATACTTTGAACGGGAGATGGAGAAGCGATTTGTCCGTACAAGCCCCTTGGGTAAAGACAGGCATTACAACAGATATTGGTGGTTCCGCCGTGATGGGAGGATATTTGTAGAAAGTTCTGATTCCCAGGAGTGGGGCTACTACAGCAGCAAGGAAGAGCTTGATATGTTGATGAGTTCACTGAATCGGAAGGGTGAGCGGGAAAGAGCACTGCAAAATCAACTGGAAAAATATTATAGTAGAATATGTTTGGAACTTCAGAAAAGATCAAAGGATCTGATACAGAATATTGCGCTGGATGAGTCTGTGCTCCGAAGGTCTACTCGTGTTCGAGCACCACCTAGGGAAAATCCTGCCAATGCTTTCCTCAAATATGTTAACAAGTGGAAGGATGAGTAG 2142 0.3894 MPLLKRKPFPLAELPKDLEPHEPVYQVRFTKEIFRDYHDYLKRINLYRQRVWMCKVTGKTSLTFEEAMVSEKRATEKVQQIPKELMAPALRIIQYSMLPLRDLANTIAENFLERLYVGAELHGKRDDGEHPCKILKVIQEGADKFRYEVAWLDKNMSTTEKTEVSAEDLVHKKQPFSRNILKSFVRESTYRNAPWVLHNELAQNYGISTDIPKELRGRAFFKNGLLICNKKRKNEDLTGRTENCKRKKSDQAKTDDSTSEKENDQCKEEPIKYPIDDLLVKPGPDDPVFTDRPSPSRDFNVPIHCVGDLLMVWDFCTSFGRLLHLTPYSLEDFENAICHKESNVVLLVESHAALFRVLMKNDGEYTSAVQKRNRKFRITMINWQEYLCDFLEMINVPGLRHYEATIKRGHYGLVDVNAKLEILRELVNRALETSIFRKKLDEVIEERQALGVTRRGEALEEGRKRREEKERLKAELDSNGSTDEHCLQIVAIDSPNNNHSIQNGDVRKKRKGEKEPPKQKDALGGSMINHSNHVSKKTLKNLSLELKEPAENGKESSRKDLQKQLKSEKDPSVKNNIEQRREYFEREMEKRFVRTSPLGKDRHYNRYWWFRRDGRIFVESSDSQEWGYYSSKEELDMLMSSLNRKGERERALQNQLEKYYSRICLELQKRSKDLIQNIALDESVLRRSTRVRAPPRENPANAFLKYVNKWKDE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto3g3274 713 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 593 659 IPR028941 -
Sto3g3274 713 Coils Coil 459 479 - -
Sto3g3274 713 Pfam DDT domain 304 360 IPR018501 -
Sto3g3274 713 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Sto3g3274 713 MobiDBLite consensus disorder prediction 503 520 - -
Sto3g3274 713 MobiDBLite consensus disorder prediction 243 267 - -
Sto3g3274 713 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 711 - -
Sto3g3274 713 SMART testlast3 303 364 IPR018501 -
Sto3g3274 713 MobiDBLite consensus disorder prediction 490 534 - -
Sto3g3274 713 Coils Coil 413 433 - -
Sto3g3274 713 MobiDBLite consensus disorder prediction 548 578 - -
Sto3g3274 713 ProSiteProfiles WAC domain profile. 22 129 IPR013136 -
Sto3g3274 713 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto3g3274 409 658 Homeobox Transcription Factor Family AT5G44180 29.167 1.47e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Sto3g3274 WAC_Acf1_DNA_bd 1.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto3g3274 - - gmx:100789956 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto3g3274 3 37457548 37463238 Sto3g3274 3 37457548 37463238 ECH