Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g2539 ATGGAATTATCAGAATTCCAAAACTCCAACTCCAACAAGCagattataacaaatatatctTCCGCCCATCTCCACCGCCACCACCGAAATCTACAACTTCCTTCCTCAACGACGTCGTCtcaccttcctcctcctccttcttcttcttcttctccttcttccactaccaattcaaattccaattcttctgcttctgcttctacTTCCTCCACCACTCCTCCTCACCTCATTGATGCCTCCCTCGCCATCGCCACCAGATCTGGGTCCGACCCGGGGACCCGACCCGGAGTGGAGCCGGATTCGGTCAAGAAGTCGCAGATTCAGGTTCAGCAGCAGTTGTCGGTTTCCACGGCGGCGGCGGTGACGGTGGCGGCCAACCCGCCGAAGCGGTCGACGAAGGATAGGCATACGAAGGTGGATGGGCGTGGGCGGAGGATTCGAATGCCGGCGACGTGTGCGGCTAGGGTTTTTCAGTTGACTAGGGAATTGGGGCATAAGTCGGACGGGGAGACGATCGAGTGGTTGTTGCAGCAGGCGGAGCCGGCGATAATCAACGCCACCGGCACCGGTACAATTCCGGCGAACTTCTCGACGCTTAATGTTTCGCTCCGGAGCAGCGGGTCGACGATCTCGGCTCCGCCGTCGAAGTCCGCTCCGCACACGTTTCACGGCGCGTTGGCTCTCGCTGCTCATGGTCAccacctccatcatcatccttaCGAAGAAGCTTTTCAACATACGGCTCTGTTAGGGtttcatcctcatcctcatcaccaccatcaccaccaccaacagCAGAATCATAATCAGAATCATCTACTGACCGCCGATCAGATTGTGGAGACGATTCCCGGCGGCGGCGGAGGTGGGGAGAGTGGCGGAGGCGATACGCACGAGAGCTATTTGAGAAAACGCTTCAGAGAAGATCTTTTCAAAGAAGATGAGCAATCACAGAACGAAAGTGGAGGGAGCTCGCCGAAGGCATTCAAGAGCAATCTACAGCAAATTCCGAAGCAACAACCAGAGGCATCTGGATCTTCCAGCCTTCTTCGTCCTTCTCCGAACATACtccccgccgccgccgccgccatgTGGGCCGTGGCTCCAGCTCCGACGAGTGGTGCGGGGAGCACAATCTGGATGCTACCCATGAGCGCCGCCGGCTCCGGGTCGGGTCCTTCACCGGAGACCCAAATGTGGGCTTTCCCCACTGCCCAATCTACTTCCGGGAATAATACCTTACAAGCGCCTCTGCATTTCatgcccagattcaatcttCCGGGAGGCCTTGAATTTcaaggtggtggtggtggaagagGAGGTTCTCTGCAATTGGGTTCCATGATAATGCCTCATCATCAGCAATCACCATCTCAGCATCTTGGATTGGGAATGTCTGAGTCTAATTTGGGTATGTTGGCTGCTTTAAATGCTTACTCTAGAGTTGGTTTGAATATGAATTCTGAGCAAAACCACCCATTggatcatcaccatcatcaacaCCAGCAGCAACAAGCTAATGACAATTATTGGAAGTTGAATTTGTGA 1548 0.4593 MELSEFQNSNSNKQIITNISSAHLHRHHRNLQLPSSTTSSHLPPPPSSSSSPSSTTNSNSNSSASASTSSTTPPHLIDASLAIATRSGSDPGTRPGVEPDSVKKSQIQVQQQLSVSTAAAVTVAANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIINATGTGTIPANFSTLNVSLRSSGSTISAPPSKSAPHTFHGALALAAHGHHLHHHPYEEAFQHTALLGFHPHPHHHHHHHQQQNHNQNHLLTADQIVETIPGGGGGGESGGGDTHESYLRKRFREDLFKEDEQSQNESGGSSPKAFKSNLQQIPKQQPEASGSSSLLRPSPNILPAAAAAMWAVAPAPTSGAGSTIWMLPMSAAGSGSGPSPETQMWAFPTAQSTSGNNTLQAPLHFMPRFNLPGGLEFQGGGGGRGGSLQLGSMIMPHHQQSPSQHLGLGMSESNLGMLAALNAYSRVGLNMNSEQNHPLDHHHHQHQQQQANDNYWKLNL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g2539 515 MobiDBLite consensus disorder prediction 120 142 - -
Sto2g2539 515 Pfam TCP family transcription factor 131 270 IPR017887 -
Sto2g2539 515 MobiDBLite consensus disorder prediction 51 76 - -
Sto2g2539 515 MobiDBLite consensus disorder prediction 312 351 - -
Sto2g2539 515 MobiDBLite consensus disorder prediction 487 509 - -
Sto2g2539 515 ProSiteProfiles TCP domain profile. 132 186 IPR017887 -
Sto2g2539 515 PANTHER TRANSCRIPTION FACTOR TCP8 22 508 - -
Sto2g2539 515 MobiDBLite consensus disorder prediction 317 351 - -
Sto2g2539 515 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 22 508 IPR005333 GO:0003700
Sto2g2539 515 MobiDBLite consensus disorder prediction 32 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g2539 Sto-Chr2 39036749 39038511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g2539 129 469 TCP Transcription Factor Family AT1G35560 44.092 7.98e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto2g2539 TCP 1.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g2539 - - gab:108467295 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g2539 2 39036749 39038511 Sto2g2539 2 39036749 39038511 ECH