Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0813 ATGCGAACACTTTGTGACGTTTGTGAGAACGCTGCTGCGATCCTCTTCTGCGCGGCAGATGAGGCTGCTCTGTGCCGTGCATGCGACGAAAAGGTGCATACATGCAACAAGCTTGCCAGTAAACATGTGCGAGTTGGGCTGGCTGACCCCACTGATGTTCCTCGCTGTGACATATGTGAAAATGCACCTGCCTTCTTTTATTGTGAGATAGATGGTAGTTCGCTGTGTATGCAATGTGACATGATAGTACATGTTGGTGGTAAAAGAACCCATGAAAGATATCTTCTATTGAGGCAGAGAGTTGAGTTTCCAGGTGATAAACCTGGCCGATTGGAAGAATTAGGGCTGCAACCCCTTCATCATCAAAATGAATTAAGGAATAGCCAAAGTCAACCCTTTAAGCTAATAACAAGAGATGGCCAGCAGAACCACAGGTTCTCACCCGTTCCAATGCTAGAAAATAATATTGATGGTCATGGAAAGATGGAAAAGAAACTAATTGATCTTAATACTAGGCCACACCGGTTAAATGGACCGGCATCAAACAACCAGgAAGCGGGTATGGATATTTCAAGTGGCAATAACAATGAATCTGCTAGTGTGGTACCAGTACAATCCTACAAACGAGAGGCTGAGAAGTAA 642 0.4439 MRTLCDVCENAAAILFCAADEAALCRACDEKVHTCNKLASKHVRVGLADPTDVPRCDICENAPAFFYCEIDGSSLCMQCDMIVHVGGKRTHERYLLLRQRVEFPGDKPGRLEELGLQPLHHQNELRNSQSQPFKLITRDGQQNHRFSPVPMLENNIDGHGKMEKKLIDLNTRPHRLNGPASNNQEAGMDISSGNNNESASVVPVQSYKREAEK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0813 213 CDD Bbox1_BBX-like 4 47 - -
Sto2g0813 213 SMART bboxneu5 51 96 IPR000315 GO:0008270
Sto2g0813 213 SMART bboxneu5 1 47 IPR000315 GO:0008270
Sto2g0813 213 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Sto2g0813 213 Pfam B-box zinc finger 53 92 IPR000315 GO:0008270
Sto2g0813 213 CDD Bbox1_BBX-like 56 96 - -
Sto2g0813 213 MobiDBLite consensus disorder prediction 175 203 - -
Sto2g0813 213 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Sto2g0813 213 MobiDBLite consensus disorder prediction 172 213 - -
Sto2g0813 213 Gene3D Classic Zinc Finger 2 95 - -
Sto2g0813 213 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 213 - -
Sto2g0813 213 ProSiteProfiles Zinc finger B-box type profile. 51 96 IPR000315 GO:0008270
Sto2g0813 213 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0813 Sto-Chr2 7031799 7033824 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Sto2g0813 zf-B_box 1.3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0813 2 7031799 7033824 Sto2g0813 2 7031799 7033824 ECH
Sto5g0172 5 1006727 1007982 Sto2g0813 2 7031799 7033824 ECH