Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0671 ATGGAGGAGGACTACTATATGAGCAGCGATGACGAGTGTCGATATTCCGATGAGGAGTGCGTCGATGGTTATGCAACGCAGGCGGAGCCCGATTTTGAGTTGGTCACCAAGAAGGGTACCACAACGAAGGTGATTACGAAGGAATCACTTCTAGCAGCACAGAAGGAGGATTTGCACAGAGTAATGGAGTTGCTGTCAGTGAAAGAGCGCCATGCACGTACACTTCTTATTTACCATCGTTGGGATGTGGATACATTGTTTACAGTGTACGTGGAAAAGGGGAAAACTCTATTATTTGCTGAAGCTGGTGTTAGTGTAGAAAATCACTGTGAGTCAGGCTCAGCAGTTCCTTCTTCAATAATGTGTGAAATCTGTATAGAGGATGTTCCCAGTGATAAAGCAACAAGAATGGACTGTGGTCACATTTTTTGCAACAACTGTTGGACAGAACATTTCATTGTCAAGATAAATGAGGGTCTAAGTAAACGCATTAGGTGCATGGCACACAAATGCAATGCTATTTGTGACGAAGATGTTATAAGGACTCTAGTTAGACAAAAGCAACCTTATATCGCAGAGAAATTTGAACGTTTTCTTCTCGAATCCTACATTGAAGACAATAAAAGAGCTAAATGGTGTCCCAGCACTCCTCATTGTGGGAATGCAATCCGTGTTGAGGATGGCCAATTATGTGAGGTAGAATGTTCATGTGGTTTCCAGTTCTGTTTTAGTTGTTTGTCAGAAGCACATTCCCCTTGTTCATGTTTGATGTGGGAGCTTTGGGCTAAAAAGTGTCAAGATGAATCAGAAACTGTCAACTGGATAACAGTTAACACAAAACCTTGTCCAAAGTGCCACAAACCAGTGGAGAAGAATGGTGGTTGCAACTTGGTCAGTTGTATTTGTGGCCAATCATTTTGTTGGCTTTGTGGTGGACCCACTGGCAGAGAACATACTTGGACATCTATAACTGGTCATAGCTGTGGTCGCTTCAAGGACCAAGAGGACAAGACTGAAAGGGCAAAGCGTGATCTATATCGGTATGTGCACTACCATAACCGTTATAAAGCTCACATGGACTCCTTCCAACTTGAAAGCAAATTAAAAGTGTCTATAGCGGAGAAGGTTGCTATTTCAGAAAAGAGACATACTGTGCTCGTAGACTATGGTTGGGTAAATGCTGGGCTCTTCAGACTTTTTCTATCTAGGCGTGTCCTATCATATTCATATCCATTTGCATTTTATATGTTTGGAGAAGAGCTATTTAAGGACGAAATGACAGAAGAGGAAAGGGTAATAAAACAGAACTTATTTGAGGATCAGCAGCAGCAGCTCGAGGCAAATGTTGAAAAGCTCTCCAAAATTTTGGAGGAACCTTTTGATGAGTTTTCAGTTAATAAGCTTATGGAGATAAGGATCAGGGTTGTCAATCTGTGTAACAGTATTGACAAACTTTGTCAAGGAATGTATGATTGCGTTGAGAATGAATTATTGGGTTCTCTTGCAATGAGTGTTCACTATATAGCTCCATACAAGTCAAGCGGCATAGAGAGAGCAGCAAAACTTTCATTTTGTCAGAGCAATGAAGCCAATAATACTGGTGGAACAGCAGACCTTGATCGCCCTTCTGGTTCCGGAAGTTCAGACGAGAGAGGATCTTCTTCTCATAAGCGTGCTCGAAAAGAGGATCTTAGAGGTGACCACATTGATCTAAACTTGCCAGCAGATCCGTAG 1734 0.4198 MEEDYYMSSDDECRYSDEECVDGYATQAEPDFELVTKKGTTTKVITKESLLAAQKEDLHRVMELLSVKERHARTLLIYHRWDVDTLFTVYVEKGKTLLFAEAGVSVENHCESGSAVPSSIMCEICIEDVPSDKATRMDCGHIFCNNCWTEHFIVKINEGLSKRIRCMAHKCNAICDEDVIRTLVRQKQPYIAEKFERFLLESYIEDNKRAKWCPSTPHCGNAIRVEDGQLCEVECSCGFQFCFSCLSEAHSPCSCLMWELWAKKCQDESETVNWITVNTKPCPKCHKPVEKNGGCNLVSCICGQSFCWLCGGPTGREHTWTSITGHSCGRFKDQEDKTERAKRDLYRYVHYHNRYKAHMDSFQLESKLKVSIAEKVAISEKRHTVLVDYGWVNAGLFRLFLSRRVLSYSYPFAFYMFGEELFKDEMTEEERVIKQNLFEDQQQQLEANVEKLSKILEEPFDEFSVNKLMEIRIRVVNLCNSIDKLCQGMYDCVENELLGSLAMSVHYIAPYKSSGIERAAKLSFCQSNEANNTGGTADLDRPSGSGSSDERGSSSHKRARKEDLRGDHIDLNLPADP 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0671 577 MobiDBLite consensus disorder prediction 551 577 - -
Sto2g0671 577 MobiDBLite consensus disorder prediction 531 577 - -
Sto2g0671 577 Gene3D - 251 498 - -
Sto2g0671 577 MobiDBLite consensus disorder prediction 531 550 - -
Sto2g0671 577 SUPERFAMILY RING/U-box 193 261 - -
Sto2g0671 577 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 2 517 IPR031127 GO:0004842|GO:0016567
Sto2g0671 577 SUPERFAMILY RING/U-box 119 205 - -
Sto2g0671 577 ProSiteProfiles TRIAD supradomain profile. 118 332 IPR044066 -
Sto2g0671 577 ProSiteProfiles Zinc finger RING-type profile. 122 170 IPR001841 -
Sto2g0671 577 Pfam Ariadne domain 332 576 IPR045840 -
Sto2g0671 577 SUPERFAMILY RING/U-box 263 320 - -
Sto2g0671 577 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ARI2-RELATED 2 517 - -
Sto2g0671 577 Pfam IBR domain, a half RING-finger domain 193 255 IPR002867 -
Sto2g0671 577 Pfam IBR domain, a half RING-finger domain 271 313 IPR002867 -
Sto2g0671 577 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 117 208 IPR013083 -
Sto2g0671 577 SMART ibrneu5 263 328 IPR002867 -
Sto2g0671 577 SMART ibrneu5 193 255 IPR002867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0671 Sto-Chr2 5689081 5692818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0671 62 545 ARIADNE family AT2G16090 69.672 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0671 K11968 - gmx:100783343 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0671 2 5689081 5692818 Sto2g0671 2 5689081 5692818 ECH