Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0631 atgGGGAGACCAAGGTGCTTCTTGGACATAGGCATAGGGGAAGAGCTAGAAGGGAGGATAGTGATCGAGCTTTACAACGACGTCGTTCCCAAAACTTGTGAGAATTTCAGTGCTCTCTGTACTGGCGACAAAGGCATTGGTCCCAATACTGGGGGATCTTGCTTTCATCGTGTTATTAAAGGCTTTATGATCCAAGGAGGAGATATATCTGCTGGAGATGGTACTGGTGGAGAATCTATATATGGGCTGAAGTTTGAAGATGAGAATTTCGAGTTGAAGCATGAAAGGAAAGGGATGTTATCAATGGCCAATTCTGGCCCTAACACAAATGGATCTCAGTTTTTTATCACCACTACGCGAACTTCTCATCTTGATGGTAAGCATGTTGTATTCGGCAAGGTAGTGAAGGGGATGGGAGTGGTCCGTTCGATTGAGCATGTTGTGACTGGCGAAGAAGACCGTCCCACTCTTGATGTTAAAATTGTGGATTGTGGAGAAATCCCTGAAGGAGCAGATGATGGAATATCTAACTTCTTCAAAGATGGTGATACTTATCCTGATTGGCCAGCAGACCTTGATGAGAGCCCTGATGATCTTCATTGGTGGATGAATGCTGTAGATTCCATTAAGAGTTTTGGTAATGAGTATTACAAGAAACAAGATTACAAAATGGCTTTGAGGAAGTATCGGAAGGCTTTACGCTACCTGGATATTTGCTGGGAGAAAGAAGGAATTGATGAAGAGAAGAGTTTAAGTTTGAGAAAAATCAAGTCTCAGATATTTACAAACAGCTCCGCTTGTAAATTGAAGTTAGGGGATATCAAAGGAGCATTATTAGATACAGAATTTGCGATGCATGAAGGAGATGACAATGCCAAAGCTTTGTTCCGACAAGGACAGGCATACATGGCGCTCCATGACATTGATGCCGCAGTTGAAAGCTTTAAAAAAGCACTGATCTTGGAGCCAAATGATGGTGGAATCAAAAAGGAACTTGCTGCTGCCAGGAGGAAGATTGCTGATAGACGTGATCGGGAAAGAAAGGCATATGAGAAAATGTTCCAAAACAGTTCTGTTAGGCACATCCTCTCATACTTGAATATTTATTGTGAATTGGTGAATCCTCGAATCCTCGGTGCACCGTTGCTGGAACCGGGGAAGTAA 1164 0.427 MGRPRCFLDIGIGEELEGRIVIELYNDVVPKTCENFSALCTGDKGIGPNTGGSCFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGKVVKGMGVVRSIEHVVTGEEDRPTLDVKIVDCGEIPEGADDGISNFFKDGDTYPDWPADLDESPDDLHWWMNAVDSIKSFGNEYYKKQDYKMALRKYRKALRYLDICWEKEGIDEEKSLSLRKIKSQIFTNSSACKLKLGDIKGALLDTEFAMHEGDDNAKALFRQGQAYMALHDIDAAVESFKKALILEPNDGGIKKELAAARRKIADRRDRERKAYEKMFQNSSVRHILSYLNIYCELVNPRILGAPLLEPGK 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0631 387 Pfam Tetratricopeptide repeat 292 325 IPR001440 GO:0005515
Sto2g0631 387 ProSiteProfiles TPR repeat region circular profile. 292 325 - -
Sto2g0631 387 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 7 166 IPR002130 GO:0000413|GO:0003755
Sto2g0631 387 SMART tpr_5 292 325 IPR019734 GO:0005515
Sto2g0631 387 SMART tpr_5 206 239 IPR019734 GO:0005515
Sto2g0631 387 SUPERFAMILY TPR-like 204 356 IPR011990 GO:0005515
Sto2g0631 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 24 39 IPR002130 GO:0000413|GO:0003755
Sto2g0631 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 55 67 IPR002130 GO:0000413|GO:0003755
Sto2g0631 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Sto2g0631 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Sto2g0631 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Sto2g0631 387 ProSiteProfiles TPR repeat profile. 292 325 IPR019734 GO:0005515
Sto2g0631 387 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 1 355 - -
Sto2g0631 387 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 165 IPR002130 GO:0000413|GO:0003755
Sto2g0631 387 Gene3D - 1 173 IPR029000 -
Sto2g0631 387 Gene3D Tetratricopeptide repeat domain 206 355 IPR011990 GO:0005515
Sto2g0631 387 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 355 - -
Sto2g0631 387 SUPERFAMILY Cyclophilin-like 3 169 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0631 Sto-Chr2 5346052 5349474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0631 14 164 U-box Gene Family AT5G67530 47.368 7.62e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0631 K05864 - gmx:100813496 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0631 2 5346052 5349474 Sto2g0631 2 5346052 5349474 ECH