LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto2g0601	ATGGGTTGGCCTTATATAGGACAGACTCTTCAACTCTACTCTGAGGACCCAAATGTCTTTTTTGCTTCAAAGCACAAAAGATATGGGGAGGTATTCAAGAGCCACATACTGGGTTGTCCCTGTGTGATGCTGGCTGGTCCTGAGGCTGCAAGGTTTGTGTTGGTGACTCATGCTCACTTGTTCAAACCCACATACCCCAAAAGCAAAGAGAAGCTCATAGGCCCTTCTGCATTGTTCTTTTCCCAAGGGCACTACCATAGCAGCATCAGAAAACTGGTCCAAACCTCTCTTTCTCCTCAAAGACTCCGAAAGTTGATCCCTCTTATAGAATCTGAGGCCATCTCTGCTTTGGAATCCTGGGTTTCTTCTTCACAAGTCATCAACGTTTTTCAAAGCATGAAAAAGttCTCTTTCGATATTGGTGTTCTGTCTGTGTTTGGTGAGCTGGACAAGAATTATAGAGATCAGCTTAAGGAGATGTACTGCATAGTAGAGAAAGGATACAATAGTTTCCCAAACTGGATACCAGGAACAGCATACTCCAAGGCACTTTTGGCAAGAAGAAGAATCAGAGAGATTATCAGTGAGATAATTTGTAAGAGAAAAGAGCAGAGATTAATGGAGAAGGATCTATTGGGTCAATTGTTGAACTACAAGGATGAAAAGGGACAAACACTGAATGATGACCAAATTGCTGATAATCTCATTGGGGTTCTATTTGCAGCTCAGGACACAACAGCTAGTGTTCTAACATGGATTCTCAAGTATCTTCATGATCACCACAAGCTTCTTCAAGCTGTAAAAGATGAGCAAGTAGCCATTTATGAAGGCAATGAAAGAGGGAAGAAAGCACTGACATGGGATCAGACCAGAAAGATGCCAATTACTTATAAGGTGATATTGGAAACTTTGAGGATGGCAAGCATCATATCTTTTACCTTTAGGGAAGCTACAGTTGATGTAGTGTACAATGGATATCTCATACCAAAAGGTTGGAAAGTGATGCCACTGTTCAGGAACATCCATCATAATCCTGAATTCTATCCATCTCCTCACAATTTTGACCCCTCAAGGTTTGAGGTTGCACCAAAGCCCAATACTTTTATGCCATTTGGGAATGGAGTGCACTCTTGTCCTGGAAATGAGCTAGCTAAGTTGAACATGCTAATTTTAGTTCACCACTTGGTAACTAAATATAGGTGGGAGGTAGTAGGAAGTCAAAGTGGAATTCAGTATAGCCCATTCCCAGTTCCTCTCCATGGTCTACCAGCAAGATTTTGGACAAACCAGTAG	1293	0.4176	MGWPYIGQTLQLYSEDPNVFFASKHKRYGEVFKSHILGCPCVMLAGPEAARFVLVTHAHLFKPTYPKSKEKLIGPSALFFSQGHYHSSIRKLVQTSLSPQRLRKLIPLIESEAISALESWVSSSQVINVFQSMKKFSFDIGVLSVFGELDKNYRDQLKEMYCIVEKGYNSFPNWIPGTAYSKALLARRRIREIISEIICKRKEQRLMEKDLLGQLLNYKDEKGQTLNDDQIADNLIGVLFAAQDTTASVLTWILKYLHDHHKLLQAVKDEQVAIYEGNERGKKALTWDQTRKMPITYKVILETLRMASIISFTFREATVDVVYNGYLIPKGWKVMPLFRNIHHNPEFYPSPHNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMLILVHHLVTKYRWEVVGSQSGIQYSPFPVPLHGLPARFWTNQ	430

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto2g0601	430	PANTHER	CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE	1	426	-	-
	Sto2g0601	430	PRINTS	P450 superfamily signature	241	258	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	P450 superfamily signature	298	309	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	P450 superfamily signature	369	378	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	P450 superfamily signature	378	389	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	Pfam	Cytochrome P450	3	405	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	371	380	IPR017972	GO:0005506\|GO:0016705
	Sto2g0601	430	SUPERFAMILY	Cytochrome P450	2	427	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	Gene3D	Cytochrome P450	1	427	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	E-class P450 group I signature	25	44	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	E-class P450 group I signature	230	247	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	E-class P450 group I signature	250	276	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	E-class P450 group I signature	297	315	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	E-class P450 group I signature	337	361	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	E-class P450 group I signature	368	378	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PRINTS	E-class P450 group I signature	378	401	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Sto2g0601	430	PANTHER	CYTOCHROME P450 26	1	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto2g0601	Sto-Chr2	5100042	5103447	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto2g0601	1	426	Cytochrome P450	AT3G19270	69.953	0.0	647

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto2g0601	2	5100042	5103447	Sto2g0601	2	5100042	5103447	ECH
	Sto5g1186	5	8003060	8005438	Sto2g0601	2	5100042	5103447	ECH