Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0536 aTGAATCGAGATTCGGCAACGATGGAGGCGCAGCAGAGAGATGTGGATCGGGTTAAGGGTCCATGGAGCCCCGAGGAGGACGAGTTGTTGCAGAAGCTCGTGCAACGGTACGGCCCTCGGAATTGGTCCGCCATAAGCAAGTCGATCCCCGGACGGTCCGGGAAGTCGTGTCGTCTCCGCTGGTGCAACCAGCTCTCGCCGGACGTGGAGCACCGGTCGTTCACTCCGGAGGAGGACGAGATCATCATAGAGGCTCACTCGAAGTACGGCAACAAGTGGGCAACCATAGCTAGGCTCTTGAACGGCCGTACTGATAACGCGATCAAGAACCATTGGAACTCGACCTTGAAACGCAAGTACTCGTCGATGATCGCCGACGaatccgccgccgccgccgccgtcgaTGAGCCGCCTGAGAAGAAATCGGCCACGGGAGACGGCTCCGCGCCGATGCGTTCGTCATTCTCGTCAGGCGGCCATTGCTACAGTCCAAGCAGTCCTTCTGGATCTGATGTGAGCGATTCAGGTCTGCCTGTAGTTTCGTCTTCGACGGTGATTCGTCCTGTAGCGAGAACCGGCGGGATCTTACCGCCTTCCCAGCAGGCCGAGTCACGCGCGAGTCAAATCCTCAAGTTCAACAAGGAACCGTGCACTGAACTCACTCTTTACCCTCTCGGAGCAGCCGAGTCAAATAACGAGTCGCAGATTGCAGAGGCAGCAACGCCTTCTCCGTATAAGGTCTCATCAATGGCAACATTTGGGCCCGATTTACTGATGGTGATGAAGGAAATGATAAGAGATGAGGTGCAAAATTACATGGCAGGGCTTGTTGATGATAAGAGATTGCGCTCGAATCGTGATTCTGGAGTTTCGAAGAACGTAGAACAACTGTACAACTACAAGTAG 906 0.5287 MNRDSATMEAQQRDVDRVKGPWSPEEDELLQKLVQRYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPDVEHRSFTPEEDEIIIEAHSKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSSMIADESAAAAAVDEPPEKKSATGDGSAPMRSSFSSGGHCYSPSSPSGSDVSDSGLPVVSSSTVIRPVARTGGILPPSQQAESRASQILKFNKEPCTELTLYPLGAAESNNESQIAEAATPSPYKVSSMATFGPDLLMVMKEMIRDEVQNYMAGLVDDKRLRSNRDSGVSKNVEQLYNYK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0536 301 Gene3D - 18 70 - -
Sto2g0536 301 CDD SANT 73 116 IPR001005 -
Sto2g0536 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 120 IPR017930 -
Sto2g0536 301 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Sto2g0536 301 PANTHER TRANSCRIPTION FACTOR MYB73 12 257 - -
Sto2g0536 301 MobiDBLite consensus disorder prediction 130 179 - -
Sto2g0536 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 69 IPR017930 -
Sto2g0536 301 SUPERFAMILY Homeodomain-like 16 112 IPR009057 -
Sto2g0536 301 Pfam Myb-like DNA-binding domain 73 115 IPR001005 -
Sto2g0536 301 Pfam Myb-like DNA-binding domain 19 65 IPR001005 -
Sto2g0536 301 SMART sant 18 67 IPR001005 -
Sto2g0536 301 SMART sant 70 118 IPR001005 -
Sto2g0536 301 ProSiteProfiles Myb-like domain profile. 14 65 IPR001005 -
Sto2g0536 301 PANTHER MYB PROTEIN-RELATED 12 257 - -
Sto2g0536 301 CDD SANT 21 63 IPR001005 -
Sto2g0536 301 MobiDBLite consensus disorder prediction 1 22 - -
Sto2g0536 301 MobiDBLite consensus disorder prediction 147 179 - -
Sto2g0536 301 Gene3D - 72 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0536 Sto-Chr2 4602140 4603297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0536 10 276 MYB Transcription Factor Family AT2G23290 48.252 4.32e-78 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto2g0536 Myb_DNA-binding 6.5e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0536 2 4602140 4603297 Sto2g0536 2 4602140 4603297 ECH
Sto2g0536 2 4602140 4603297 Sto10g0313 10 2486254 2487396 ECH
Sto5g1150 5 7678687 7679631 Sto2g0536 2 4602140 4603297 ECH