Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0048 ATGATGGCCGCGGTTTTGGGTAATCTAGATTCTGATATGAGCTACATTTTGCAGACACGTAGAGAGCAGAACCTAATTTTCAAATCTGAAACGTTTTACATAATTCTCTTAACTCCATCTGCTATCACTGCATGCCCATCTAGCTCTAACCATACGTTTCTTGCTATAAATATAGGTATAGCATTAGCAATGCAAGTAGCATTGTTGTTGAGTGAGATATGGAGCAACAAGAAGTTCCTGAGCCAGCCTCGCTACTTCTGCAAGTCATGCAAGAGGTACTGGACTCAAGGTGGGAGCTTGAGGAACGTCCCCATCGGAGGTGGGTCCCGCAAGGGAAAGCGCGCCAAGACCACTACTAGTCATGATGAGGTTGAGGTGGTCCCAACCCCACCACTAATGGACTCCTCTGCTTCTCCCTTTTATGGTGTTGGTGGCTATTTGTCGTCTCTGCAGCCGGCGTTTCATAACTCATTCaacccatcatcatcatctctgaTTAATTCTCCCAATTTGGAATTAGGCGGAAACAGAGAGGTGGAAGAAGGAGGACTAGGAGGTTTGATTCTGACGACCATGAATTCGCATCATCATGATTGGTCCCAAACCTTCATGCCTAGTAATGGTAATGGAATTGGTGGATCATCTTCTTCCTTAATCCCAAATCATGATCAATTGCCTCACCTCCCAGGGTTTGGCCCTCTCCCATGA 708 0.4463 MMAAVLGNLDSDMSYILQTRREQNLIFKSETFYIILLTPSAITACPSSSNHTFLAINIGIALAMQVALLLSEIWSNKKFLSQPRYFCKSCKRYWTQGGSLRNVPIGGGSRKGKRAKTTTSHDEVEVVPTPPLMDSSASPFYGVGGYLSSLQPAFHNSFNPSSSSLINSPNLELGGNREVEEGGLGGLILTTMNSHHHDWSQTFMPSNGNGIGGSSSSLIPNHDQLPHLPGFGPLP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0048 235 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 78 155 IPR045174 GO:0003700|GO:0006355
Sto2g0048 235 MobiDBLite consensus disorder prediction 202 222 - -
Sto2g0048 235 MobiDBLite consensus disorder prediction 104 129 - -
Sto2g0048 235 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Sto2g0048 235 MobiDBLite consensus disorder prediction 202 235 - -
Sto2g0048 235 Pfam Dof domain, zinc finger 76 114 IPR003851 GO:0003677|GO:0006355
Sto2g0048 235 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 78 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0048 Sto-Chr2 457502 458337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0048 73 186 C2C2-Dof Transcription Factor Family AT5G60200 40.000 2.45e-19 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto2g0048 zf-Dof 3.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0048 - - aip:107621958 98.5969