Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0047 ATGGAAAAACCGAACCAAGAGCTTATTGAGCAGCAACACCAAATCCTCAAGTGCCCTCGCTGTGATTCATCCAACACCAAATTCTGTTACTACAACAACTACAGTTTGTCTCAGCCAAGACACTTCTGCAAGGCCTGCAAGAGATACTGGACCAGAGGAGGAACCCTCCGCAATGTTCCTGTCGGTGGCGCCTGCCGCAAAAACAAGCGTCTCAAGCGACCACTTACCACTACTACTACTTCTTCCCAACCACCTCGGATCGATGTTGTTACTGCTCCTACTTCAACTACCTCTTCCAATCATATCAACAACAATATTAATCCCTTGTTTTATGACATCACTTACAATAATCTCCCACTACTTCCAACGTATGAACAATTACTTCAGCCTCAGCCTCATCACATGATCATGAATACTACTAATTCTAGTGTTGGAGTTGGATTGGATTTTACATCTGCCGGAATTATGTACGGTCATGGTCATGATCATGAGAATGCCTTTTCTGGTGCAAGTAACACTACTAGTTTTGAGAGATTTGGTTCAGCACTAgaagatcatcatcatcacctgcAAATAGGTGTTGTATTCTTCACAGAAGAATCCTCAGAACTTGGTACCACAGATTTTGAAATGTCTTCTGCTTCAGAAGCAGGGAAATTCAAAATAAGCGAGGACAGGAATGGATCCGTAGCTGCATTTGATACATTAGCGCTGTTTGACCGATATCCACTGCCACCAAGAAGCACTTGTAAATGA 756 0.4167 MEKPNQELIEQQHQILKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGACRKNKRLKRPLTTTTTSSQPPRIDVVTAPTSTTSSNHINNNINPLFYDITYNNLPLLPTYEQLLQPQPHHMIMNTTNSSVGVGLDFTSAGIMYGHGHDHENAFSGASNTTSFERFGSALEDHHHHLQIGVVFFTEESSELGTTDFEMSSASEAGKFKISEDRNGSVAAFDTLALFDRYPLPPRSTCK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0047 251 Pfam Dof domain, zinc finger 14 70 IPR003851 GO:0003677|GO:0006355
Sto2g0047 251 ProSiteProfiles Zinc finger Dof-type profile. 16 70 IPR003851 GO:0003677|GO:0006355
Sto2g0047 251 ProSitePatterns Zinc finger Dof-type signature. 18 54 IPR003851 GO:0003677|GO:0006355
Sto2g0047 251 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 219 IPR045174 GO:0003700|GO:0006355
Sto2g0047 251 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 219 - -
Sto2g0047 251 MobiDBLite consensus disorder prediction 74 97 - -
Sto2g0047 251 MobiDBLite consensus disorder prediction 72 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0047 Sto-Chr2 455869 465063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0047 16 123 C2C2-Dof Transcription Factor Family AT1G28310 62.609 6.70e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto2g0047 zf-Dof 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0047 - - gmx:778101 158.688