Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0881 ATGGAAAATAATCAAATACTTCGTGAAGCTAGTTGGTCCAAGAGCCAGAATACGCCGCAATATTCTTCCTCCTCTAGTTCCGATTATTCTACAGAGGATTCCGGAGATCTGGAGCCGGATTTTGTTATCCCTCGGCAAGGTCCTGCGATTGAGTTTTCTGCACCATATATCAACATGCAGAGGGACTTCTGGCGTAACTGTCTCATCAGAGTTCTTGTTGATGATAATATGGTAAAGGCTTCTCGTTTGCAGAATATTATCAACAGAGTCTGGAGCCTACAACAACCAGTGCGGGTTGTCGGTTGTAGTAAGAATGTATTTGTCTTTGAGTTGTATTCCATTGTTTATCATACTCATGAATTTCGTCTTATTCATTTCACAAGAACAAGATCGAGTTCCAGTTCAAGTTCTAGTTCTCCTAGTTCTAATGTTTATCGTGTTTCTGATGATTCATCCTCGGAGTCAGAGGGTAGTTCATCTTCACATTCTTCTCCTACTTCTCAATCAGAACATGTTAATGTAGTAGATGAACCAATGGAGGGAGAGGAAGACCCTTTGACCCCATTAGGATATTATTCTGATCCTATTGGTCAAGGAAGTCAAGGTGGGGTAGCTTCTAATTCCCCACATTCATTTAATATCAATGCTCCTCTTGCTCCTCAGTCTCCAATCAATTGGGAGTTAATTGCGGCTGAAAGTGCACGTTGGCATCCAACTTCGAAAGGGGGTACACAATCTGAATGGAGGGAGGAAGCAGAGAATAGGAATAAAATGTTTTTTGGGCTTGCTGATGAATTACAAGTTTTGGTTCAATCTGCTTTGCCAGTTTCAGATCCTGCTGAAAGGGGTCCACATGAGCAATTGATGAATCAGATCAATCCAAATCCAGTTCAGAGCGCTTCTTCGGTGGATGTAACACCAAAGGCACAGGTGGCAGGCTCAATGTATAGTGACTCAGTGGCTCTCAAGCGGCAACTTCTTCTACCAGATGCATGTGTTACTAAACGTTTACGTTGTCGTGATGTTTCTCGGTCGAAGGCATTTCATAAGATTGCTTTTACTGATCCAACAGGTCCGGTTGTGAAGAAACCTCGTCATGCCACTTCTGATCCCTCTGGTGATCGTCTTGCAAATCAACGGATTCATCATGATCTTATTCGAAGGGGTCCAGCAATTTCTCATCTTATGTATGCCGATGATACAATTCTTTTCTTTAAGGCAGACGATTTAAATTGTGCATCGGTCAAGAATGCTATTGATATGTATGCTAAATTAGCAGGTCAACAGCTTAATCTTGATAAGTCCTTTCTTGTTTTTAGTCCTAATACTTCACGTGCAGTCAAAGATCGCATAGCACGTCATTTGGGAGTTGCAGTTTCAACGAAGATTGATCGTTACTTGGGGTCCTTTGTAGACAACAAGTTGTCAGATCCTCAAAATTATATTGTTCTTGTTGAAAGAATTGGAAACAAATTATCCGGTTGGAAGGCTAAAACTCTTTCACAAGCTAGACGTCTTACTCTTATCAAGTCGGTCCTTCAGCGTCTTAATATTTATCATATGTCTTCACTTACAATCCCGAGAGAATATTGTCAGAAGATGGGCGCGGACCAGGTTTCGCTTGACATGGTAGTCCTTCCGAAGCTGGGATATCTTTCTCTAATCAGAGGGCGTTTCCTTCACTACAGTGAGGCGATCGTTTCGAGCGATGTCCTTCTTCTACTGCAAAGACAAAACATATTATTAAGGCTTGTAGATGCGGATCTTTTTCAAGAAGTTGGTGATTTAGAATGTATTATGCCTCAGATGGAAGGGATACCTCAAAGTTCATTCACAAAGCCATCATCAGCAGTAGTAATAGAGAAGAAAGCAAGGCCACAAGAGCAATTGAATTGCCCAAGGTGCCATTCAATCAACACCAAGTTTTGCTATTACAACAACTATAGCCTCACACAGCCTAGATACTTCTGCAAGACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCCGAAACATTCCGGTCGGAGGAGGTTCTAGAAAGAACAAGACTAAGGTCATCACTACTGCCGCCGCCATCACCACCTCGACctcatcgtcatcatcatccAAAATTCCTGACCTAAACCCTCCTATACCGACCTTCTCAGTAGTACTCGAGCCATCTTCAGGACTGAACGACCTGAGTCTGAATCCGGGTCATCGGACCCAGACTAtgatacaaaaccctaaattgcaagcAGGAGGCCAGGATCTTAATCTAGCCTTCCcaacatcttcttcttcttctctttcagcTCCTAGGGTTTTTAATAGTAATATCAATCCTTATGCTTCTTCATTGATGATGATGCCAAACAACTCATATAGTAACCTTTATAACCCATCAGGTTTTATTCCCACCATGCAAGATCATGAAACTAAACCTAGCAGCCATATGGGATTTTCAGTGGATGGGCTTGGAAATAGGTCATATGGATCAGTTCAAGAAAGTGAGGACAATGGTGGGAGGCTTTTGCTTCCTTTTGGTGGAGGAATCACGCAGATGAATTCAGGTGGTACCGCTGATGtggaacaaaataataatatcgaTAGTAAAGAACAAGGGAATTCATCAAGTGGGTTTTGGACCGGAATGATTGGTGAAGGATCAtggtaa 2658 0.4093 MENNQILREASWSKSQNTPQYSSSSSSDYSTEDSGDLEPDFVIPRQGPAIEFSAPYINMQRDFWRNCLIRVLVDDNMVKASRLQNIINRVWSLQQPVRVVGCSKNVFVFELYSIVYHTHEFRLIHFTRTRSSSSSSSSSPSSNVYRVSDDSSSESEGSSSSHSSPTSQSEHVNVVDEPMEGEEDPLTPLGYYSDPIGQGSQGGVASNSPHSFNINAPLAPQSPINWELIAAESARWHPTSKGGTQSEWREEAENRNKMFFGLADELQVLVQSALPVSDPAERGPHEQLMNQINPNPVQSASSVDVTPKAQVAGSMYSDSVALKRQLLLPDACVTKRLRCRDVSRSKAFHKIAFTDPTGPVVKKPRHATSDPSGDRLANQRIHHDLIRRGPAISHLMYADDTILFFKADDLNCASVKNAIDMYAKLAGQQLNLDKSFLVFSPNTSRAVKDRIARHLGVAVSTKIDRYLGSFVDNKLSDPQNYIVLVERIGNKLSGWKAKTLSQARRLTLIKSVLQRLNIYHMSSLTIPREYCQKMGADQVSLDMVVLPKLGYLSLIRGRFLHYSEAIVSSDVLLLLQRQNILLRLVDADLFQEVGDLECIMPQMEGIPQSSFTKPSSAVVIEKKARPQEQLNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKTKVITTAAAITTSTSSSSSSKIPDLNPPIPTFSVVLEPSSGLNDLSLNPGHRTQTMIQNPKLQAGGQDLNLAFPTSSSSSLSAPRVFNSNINPYASSLMMMPNNSYSNLYNPSGFIPTMQDHETKPSSHMGFSVDGLGNRSYGSVQESEDNGGRLLLPFGGGITQMNSGGTADVEQNNNIDSKEQGNSSSGFWTGMIGEGSW 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0881 885 MobiDBLite consensus disorder prediction 130 216 - -
Sto1g0881 885 MobiDBLite consensus disorder prediction 849 879 - -
Sto1g0881 885 MobiDBLite consensus disorder prediction 130 173 - -
Sto1g0881 885 MobiDBLite consensus disorder prediction 849 885 - -
Sto1g0881 885 MobiDBLite consensus disorder prediction 1 41 - -
Sto1g0881 885 Pfam Dof domain, zinc finger 628 684 IPR003851 GO:0003677|GO:0006355
Sto1g0881 885 MobiDBLite consensus disorder prediction 199 216 - -
Sto1g0881 885 PANTHER DOF ZINC FINGER PROTEIN DOF1.8 613 880 - -
Sto1g0881 885 MobiDBLite consensus disorder prediction 1 32 - -
Sto1g0881 885 ProSiteProfiles Zinc finger Dof-type profile. 630 684 IPR003851 GO:0003677|GO:0006355
Sto1g0881 885 ProSitePatterns Zinc finger Dof-type signature. 632 668 IPR003851 GO:0003677|GO:0006355
Sto1g0881 885 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 613 880 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0881 Sto-Chr1 9535656 9549177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0881 616 885 C2C2-Dof Transcription Factor Family AT2G46590 41.905 7.17e-47 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sto1g0881 zf-Dof 3.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0881 - - gmx:778110 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0881 1 9535656 9549177 Sto9g2724 9 29119861 29121447 ECH
Sto1g0881 1 9535656 9549177 Sto5g1309 5 8937010 8938749 ECH
Sto1g0881 1 9535656 9549177 Sto1g0881 1 9535656 9549177 ECH
Sto6g1177 6 11291066 11292538 Sto1g0881 1 9535656 9549177 ECH