Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto1g0362 | ATGCAAGACCCGACGGCATTCCAACCTAATATGATGAAACCCCACTTCCCCGAACAAGAACAGCTCAAATGCCCTCGCTGTGACTCCTCCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCGCAGCCGCGCCATTACTGCAAGAATTGCAGAAGGTACTGGACCAAAGGCGGCGCTCTGCGCAACATACCAGTTGGTGGTGGAAGCCGAAAGAACACGAAACGATCATCATCATCGgcaaccaccaccaccgccgccgccacGAAACGCCCTGCTACGCCGTCATCGTCGTCTCCTACTCCGTCATCGGTTTCCTCTGCCTCTGCAACGCACGCCTCAGATCCGGATCATGACCCGACCTGGATGTATTCCAACCCGGGTAGCGATCAGTTTGGTGTTGGTGTTGTTGGTGTTAGTGGTGGGAGTTTTAGCTCCCTTCTGGGATCGGCCGGGCATTGGGGGAGTTTATTGCAGGGTTTGAATCCGAATGGGTCGGATTTGAAAATCGTGCAGCTGGGTTCGGATACGGGTCGAAACCCGGGTTTGGAGAGACAGAAAAACAATGGGAATTCAGAAACCTTCCTGGGTATTCAAAATGGTGATTCAAGCTGTTGGAATAATAAtactggtggtggtggtagtagTAATGGGTGGTCTGATCTTGCAATATACACACCTGCATTTTCTGATGCTATGGAGCAATGGAGTATGAAGTGCCACCCTCCAGAGAGGTGA | 741 | 0.4737 | MQDPTAFQPNMMKPHFPEQEQLKCPRCDSSNTKFCYYNNYNLSQPRHYCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSSSATTTTAAATKRPATPSSSSPTPSSVSSASATHASDPDHDPTWMYSNPGSDQFGVGVVGVSGGSFSSLLGSAGHWGSLLQGLNPNGSDLKIVQLGSDTGRNPGLERQKNNGNSETFLGIQNGDSSCWNNNTGGGGSSNGWSDLAIYTPAFSDAMEQWSMKCHPPER | 246 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto1g0362 | 246 | ProSiteProfiles | Zinc finger Dof-type profile. | 22 | 76 | IPR003851 | GO:0003677|GO:0006355 | |
Sto1g0362 | 246 | MobiDBLite | consensus disorder prediction | 176 | 197 | - | - | |
Sto1g0362 | 246 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 10 | 229 | IPR045174 | GO:0003700|GO:0006355 | |
Sto1g0362 | 246 | ProSitePatterns | Zinc finger Dof-type signature. | 24 | 60 | IPR003851 | GO:0003677|GO:0006355 | |
Sto1g0362 | 246 | PANTHER | DOF ZINC FINGER PROTEIN DOF3.1-LIKE | 10 | 229 | - | - | |
Sto1g0362 | 246 | MobiDBLite | consensus disorder prediction | 63 | 127 | - | - | |
Sto1g0362 | 246 | MobiDBLite | consensus disorder prediction | 71 | 115 | - | - | |
Sto1g0362 | 246 | Pfam | Dof domain, zinc finger | 20 | 76 | IPR003851 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto1g0362 | Sto-Chr1 | 2921247 | 2922116 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto1g0362 | 1 | 159 | C2C2-Dof Transcription Factor Family | AT1G51700 | 50.000 | 2.61e-45 | 149 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Sto1g0362 | zf-Dof | 1.2e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto1g0362 | - | - | qlo:115988764 | 249.21 |