Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0238 ATGGGTACTATGAGTAGAGGTAGAGTGTTTGTGCTTCTAATAATAGTGAGGTCTCTTGCAGCTACAGCATCAGCATCATTCGGCTGCGATGAAGCATCCACGTGTCGCTCCCTGGTTGGTTACAAACCCCAATACCGCACCACTTTGGGAGCCATCCAAACGCTGTTTAACGTAAGCGACACGAGGGACATCGCTGGGGCGAACGGCCTTCCCGAGTGGACCCCACGGGACCATACGGTGGACGGGAATCAGAGAATCCGGATTCCGCTGGAGTGCGAGTGCTATGAAGACGAAGGGGGATTATTGAGGAGTAGGTCAAAAAATCGGCTCAAATACAAGCTGAAGGCGGGAGATACACTTTACAAAATAGGAATGGATGTGTTCTCAGGATTGGTGGATTACAAGCAGATTGAGTACGTGAATCCTGATGCGGTACCAGTGAATTTGACGATCGGTAGGGAAGTGATTATTCCGTTTCTGTGCGGTGAGTCTGAGACCGTTGTCGATATTCCCTTCCCAGTTTGTTCCACCATGGTGAGAAATGATTCCTTGGACTATCCTTTGCTTGTTCCAAATGGTACTTACATGTACACCGCAAATGGGTGTGTGAAGTGCAAGTGTGACGCCGCCAATAACTGGACATTACATTGTGAGCCATCTAAACTCAAACCAACCAATTGGTCTACTCGCCCATCTATGCAATGCAACAATTCAAGTAACATGTATATTGGTAATACCACATCCTCAGATTCCCACAATGTCACTTTTTGTGCCTATGCTGGTTATGGGAATCAAACTATCTTCCCCACTCTTGCAACACAGCCCACTCCACCTGATATTAATTTGATGAATGCAGAAGAAAGCAGGTGGTGGATATGGCTCGTTGTGGTCGGAGGACTTATTGTTGTAACTATATTATGCTACTTAATCTGGAGGAAATACATAACTGAAGTTGACAGAAAATGGAAGCAAAATAAGCTAATATCGGAAATTGGAAACAGTACAGTAGCTTCCATTCTGTATTACAAAGCAAAAGGAAACAGAAAAGATGGCAAAACAAACCATGAAATGCAGATATTCAACTTTGAAAGCATTGTTACTGCTACGGACAATTTTTCAATTGCAAACAAGTTAGGAGAGGGTGGCTTTGGACCCGTTTATAAGGTTTTCTCCATAACATCATAG 1185 0.4422 MGTMSRGRVFVLLIIVRSLAATASASFGCDEASTCRSLVGYKPQYRTTLGAIQTLFNVSDTRDIAGANGLPEWTPRDHTVDGNQRIRIPLECECYEDEGGLLRSRSKNRLKYKLKAGDTLYKIGMDVFSGLVDYKQIEYVNPDAVPVNLTIGREVIIPFLCGESETVVDIPFPVCSTMVRNDSLDYPLLVPNGTYMYTANGCVKCKCDAANNWTLHCEPSKLKPTNWSTRPSMQCNNSSNMYIGNTTSSDSHNVTFCAYAGYGNQTIFPTLATQPTPPDINLMNAEESRWWIWLVVVGGLIVVTILCYLIWRKYITEVDRKWKQNKLISEIGNSTVASILYYKAKGNRKDGKTNHEMQIFNFESIVTATDNFSIANKLGEGGFGPVYKVFSITS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0238 394 ProSiteProfiles LysM domain profile. 110 157 IPR018392 -
Sto1g0238 394 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 20 164 - -
Sto1g0238 394 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 166 274 - -
Sto1g0238 394 SUPERFAMILY Protein kinase-like (PK-like) 357 391 IPR011009 -
Sto1g0238 394 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 20 164 - -
Sto1g0238 394 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 166 274 - -
Sto1g0238 394 Gene3D Phosphorylase Kinase; domain 1 341 392 - -
Sto1g0238 394 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0238 Sto-Chr1 1787985 1792701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0238 9 279 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 36.025 2.05e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0238 - - gmx:100811504 370.163