Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0088 TTGGTTGTAATTGGCGTAGTATTCCCAGCAATTGTGATGATTACATTAATGTACCAAAACTCAATTTTCAATCTTTTTGAGGGGTTTTCAAAAGACAAGGTACTAGGAATAGGAACAACACCTCACAACGTTACAACTATGGACTTAGGATTCAGAACAAGACTCAACAATACATCAAATCAGAAAGAGAATAAAACGTTCTCAGAGGGaatcacaaacaattcaacAAATGATTCAACCCCACTTATCAAAATCAATGCACAAAATCTGCATCTTGATGGGCTTCTAGCTTCTGGATTTGATGAAGCTTCATGCATAAGCAGATTTCAATCTTATTTATACCGCAAAGCCTCCCCTCACAAACCCTCTTCATATCTCATATCCAAGCTTCGAAATTATGAAGAAATTCACAGAAAGTGTGGACCTCGTACCAGATCTTACAACACAACCATGAGAAACCTCGTGAGATCGAAGGAAAAACATCATAGTACCAACACAAGTTGTAAGTACATTGTTTGGACACCTGTGAATGGATTAGGGAACAGAATGATAAGCATGGCAGCCACATTTCTTTATTCTCTGCTCACAGACAGAGTCCTTCTCGTGAAATTTGAGGATGACATGATGGGTTTGTTCTGTGAGCCATTCCTTAATTCAACATGGGAGTTTCCAAAAGATTCTCCGTTTTGGGATCCAACTCATGTTGAGACATATCAGAGAATgatggagaaggagaagaataagAGTTCACTCCCATTGGTTGTTCATCTTAATTTCCGACACACACAAGGTGATCCTGAGAAGTTCTTCCACTGTGATCAAAGTCAAAAACTTGTTCAAAAAGTTCCCTTTTTGATCTTGCAGACAGATCAATATTTTGTCCCTTCTCTTTTCATGGCACCGTCTTTTAGCTCTGATATCACACAAATGTTCCCAGAAAAAGACACAGTTTTTCACCATTTGGGGAGGTACCTCTTTCACCCTTCAAATCAAGCATGGGGACTAATAAGCAGATTCTACCAAGCATACATGGAAAAATCAGATCAGAAAATTGGCCTCCAAATAAGACTATTCTCTCCTGATTCCACCCCACATCAAGCAGTACTTGATCTCCTCTTAAGTTGTGCCTTGCAGCACAAGCTACTCCCGGAACTCGACACGGAAAACCCGGTTACCTCCACCCGAAGAAGCACGACTTTGAAGGCCGTGCTAGTGGCGTCTTTGTTCCCGGAGTACGGTGACAGTTTAAGGAATATGTACGTGACAAGACCAACGATTACAGGAGAAGTGGTGGGGGTGTATCAACCAAGTCATGAAGAGCATCAAAAGTTTCACAACAATATGCACAACATGAAGGCTTGGACTGAGATGTATCTTTTGAGTTTGTGTGATGAGTTGGTGACTACATCTTTGTCTACTTTTGGGTATGTGGCTCAAGGTTTGGGAGGATTGAAGCCATGGCTTCTGTACAGGATAGTGGGGGGGGATGAGACACAGCATGATCCACCATGTGTGAGGGACTTCTCAATGGAGCCTTGCCATCATATCCCTCCTAAGCATGATTGTGAAGGAAAGGCTAGTACAGACTTTATTACtacttctttcccttttataaGGCCTTGTATGGACTATTCTTTTGGAGTCAAGATGGCTAATGTTTCTGTGTAG 1668 0.4017 LVVIGVVFPAIVMITLMYQNSIFNLFEGFSKDKVLGIGTTPHNVTTMDLGFRTRLNNTSNQKENKTFSEGITNNSTNDSTPLIKINAQNLHLDGLLASGFDEASCISRFQSYLYRKASPHKPSSYLISKLRNYEEIHRKCGPRTRSYNTTMRNLVRSKEKHHSTNTSCKYIVWTPVNGLGNRMISMAATFLYSLLTDRVLLVKFEDDMMGLFCEPFLNSTWEFPKDSPFWDPTHVETYQRMMEKEKNKSSLPLVVHLNFRHTQGDPEKFFHCDQSQKLVQKVPFLILQTDQYFVPSLFMAPSFSSDITQMFPEKDTVFHHLGRYLFHPSNQAWGLISRFYQAYMEKSDQKIGLQIRLFSPDSTPHQAVLDLLLSCALQHKLLPELDTENPVTSTRRSTTLKAVLVASLFPEYGDSLRNMYVTRPTITGEVVGVYQPSHEEHQKFHNNMHNMKAWTEMYLLSLCDELVTTSLSTFGYVAQGLGGLKPWLLYRIVGGDETQHDPPCVRDFSMEPCHHIPPKHDCEGKASTDFITTSFPFIRPCMDYSFGVKMANVSV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0088 555 Gene3D - 165 262 - -
Sto1g0088 555 Pfam Xyloglucan fucosyltransferase 70 522 IPR004938 GO:0008107|GO:0016020|GO:0042546
Sto1g0088 555 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 2 554 - -
Sto1g0088 555 PANTHER FUCOSYLTRANSFERASE 2-RELATED 2 554 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0088 Sto-Chr1 557039 559748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0088 63 551 Xyloglucan Fucosyltransferase1 AT2G03220 49.597 2.08e-166 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0088 K13681 - gmx:100818288 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0571 9 5571666 5577172 Sto1g0088 1 557039 559748 PCT